RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 WASHC1A8K0Z3 465 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 MYO1GB0I1T2 1018 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
LIMS3-205ENST00000487150 ACOX3O15254 700 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 PLOD3O60568 738 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 SLC25A12O75746 678 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 OR2J2O76002 312 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 TGDSO95455 350 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 TACR1P25103 407 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
LIMS3-205ENST00000487150 DPY19L1Q2PZI1 675 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF766Q5HY98 468 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 FAM180AQ6UWF9 173 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 RGS9BPQ6ZS82 235 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 SPATA19Q7Z5L4 167 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 C9orf40Q8IXQ3 194 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 CCDC116Q8IYX3 515 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 CYP4Z2PQ8N1L4 340 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 GOLM1Q8NBJ4 401 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 MAGEB18Q96M61 343 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 EPN3Q9H201 632 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
LIMS3-205ENST00000487150 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 NEUROD4Q9HD90 331 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 TIMMDC1Q9NPL8 285 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 DDX18Q9NVP1 670 aaKnown RBP13.58□□□□□ -0.24
LIMS3-205ENST00000487150 PNPOQ9NVS9 261 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 TAS2R9Q9NYW1 312 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 PLA2G3Q9NZ20 509 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 ERVK-11Q9UQG0 969 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 KLF13Q9Y2Y9 288 aaPredicted RBP13.58□□□□□ -0.24
LIMS3-205ENST00000487150 BOD1L1Q8NFC6 3051 aa13.58□□□□□ -0.24
LIMS3-205ENST00000487150 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 PLOD2O00469 737 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 AKAP10O43572 662 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 CRYABP02511 175 aaKnown RBP13.57□□□□□ -0.24
LIMS3-205ENST00000487150 SSTR4P31391 388 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 CD96P40200 585 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 CLNS1AP54105 237 aaKnown RBP13.57□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF750Q32MQ0 723 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 PIGGQ5H8A4 983 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 RTL4Q6ZR62 310 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 ATCAYQ86WG3 371 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 BCORP1Q8N888 145 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF615Q8N8J6 731 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 MDS2Q8NDY4 140 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 OR9A2Q8NGT5 310 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 CPT1CQ8TCG5 803 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 UCN3Q969E3 161 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 EGLN2Q96KS0 407 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 AMDHD1Q96NU7 426 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 NPAS2Q99743 824 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 SIKE1Q9BRV8 207 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 MARCOQ9UEW3 520 aaPredicted RBP13.57□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
LIMS3-205ENST00000487150 SMG1Q96Q15 3661 aaKnown RBP13.57□□□□□ -0.24
LIMS3-205ENST00000487150 MED13Q9UHV7 2174 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CCDC88CQ9P219 2028 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 A0A1W2PS29 197 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 WWP2O00308 870 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 ABCB7O75027 752 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 LRATO95237 230 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 RASAL1O95294 804 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 JUNP05412 331 aaKnown RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 KITP10721 976 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 IDO1P14902 403 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 GPC1P35052 558 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CLDN8P56748 225 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 IRX1P78414 480 aaPredicted RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 TLE1Q04724 770 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 MLC1Q15049 377 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 ZNHIT3Q15649 155 aaPredicted RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 LTB4RQ15722 352 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 PLEKHN1Q494U1 663 aaPredicted RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CPTPQ5TA50 214 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 DGAT2L6Q6ZPD8 337 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 ACAD11Q709F0 780 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CAMKMTQ7Z624 323 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 ZNF321PQ8N8H1 164 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 Q8NA96 180 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 POGLUT1Q8NBL1 392 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 OR52R1Q8NGF1 315 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 DNAJB8Q8NHS0 232 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CLHC1Q8NHS4 586 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 C16orf52Q8NHV5 167 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 ACTRT2Q8TDY3 377 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CKAP2Q8WWK9 683 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 GFM2Q969S9 779 aaKnown RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 SCMH1Q96GD3 660 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 BHLHE41Q9C0J9 482 aaPredicted RBP13.56□□□□□ -0.24
LIMS3-205ENST00000487150 MAP10Q9P2G4 905 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 BAIAP2L1Q9UHR4 511 aa13.56□□□□□ -0.24
LIMS3-205ENST00000487150 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms