RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CPMP14384 443 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 ZFP36L2P47974 494 aaKnown RBP22.54■■□□□ 1.2
LIME1-206ENST00000487026 MAPK12P53778 367 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 GGTA1PQ4G0N0 100 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 C1orf185Q5T7R7 199 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 LETMD1Q6P1Q0 360 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 COMMD6Q7Z4G1 85 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 LIX1LQ8IVB5 337 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 PRR22Q8IZ63 422 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 ADIPOR1Q96A54 375 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 TP53INP1Q96A56 240 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 ZNF180Q9UJW8 692 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 CES1P1Q9UKY3 287 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 NPFFR2Q9Y5X5 522 aa22.54■■□□□ 1.2
LIME1-206ENST00000487026 A0A087WUV0 522 aaPredicted RBP22.53■■□□□ 1.2
LIME1-206ENST00000487026 TP53I11O14683 189 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 TRIM3O75382 744 aaPredicted RBP22.53■■□□□ 1.2
LIME1-206ENST00000487026 PORP16435 677 aaPredicted RBP22.53■■□□□ 1.2
LIME1-206ENST00000487026 CAPN3P20807 821 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 CNTFP26441 200 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 TMEM198Q66K66 360 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 DMRTC2Q8IXT2 367 aaPredicted RBP22.53■■□□□ 1.2
LIME1-206ENST00000487026 TRPC4APQ8TEL6 797 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 SELENOMQ8WWX9 145 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 HBEGFQ99075 208 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 ACKR4Q9NPB9 350 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 ZNF225Q9UK10 706 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 DTX4Q9Y2E6 619 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 PCDHA9Q9Y5H5 950 aa22.53■■□□□ 1.2
LIME1-206ENST00000487026 OTCP00480 354 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 SNRPAP09012 282 aaKnown RBP22.52■■□□□ 1.2
LIME1-206ENST00000487026 CTAGE8P0CG41 777 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 S1PR1P21453 382 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 GDF1P27539 372 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 FEN1P39748 380 aaKnown RBP22.52■■□□□ 1.2
LIME1-206ENST00000487026 GALNT1Q10472 559 aaPredicted RBP22.52■■□□□ 1.2
LIME1-206ENST00000487026 RPS6KA2Q15349 733 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 C10orf62Q5T681 223 aaPredicted RBP22.52■■□□□ 1.2
LIME1-206ENST00000487026 FAM111BQ6SJ93 734 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 CTAGE4Q8IX94 777 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 LIX1Q8N485 282 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 MNS1Q8NEH6 495 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 NEIL3Q8TAT5 605 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 TM4SF18Q96CE8 201 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 RILPQ96NA2 401 aa22.52■■□□□ 1.2
LIME1-206ENST00000487026 CELSR1Q9NYQ6 3014 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 ANKRD33BA6NCL7 494 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 CAPN14A8MX76 684 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 ERAL1O75616 437 aaKnown RBP22.51■■□□□ 1.19
LIME1-206ENST00000487026 TRAPPC6AO75865 159 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 OR4F21O95013 312 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 HOXD4P09016 255 aaPredicted RBP22.51■■□□□ 1.19
LIME1-206ENST00000487026 DEKP35659 375 aaKnown RBP22.51■■□□□ 1.19
LIME1-206ENST00000487026 HSD17B3P37058 310 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 MGAT2Q10469 447 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 TCHHL1Q5QJ38 904 aaPredicted RBP22.51■■□□□ 1.19
LIME1-206ENST00000487026 C6orf163Q5TEZ5 329 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 FAM180BQ6P0A1 224 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 SLC48A1Q6P1K1 146 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 CDH24Q86UP0 819 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 SIMC1Q8NDZ2 872 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 SPPL2AQ8TCT8 520 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 ZNF597Q96LX8 424 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 BRINP2Q9C0B6 783 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 QPCTLQ9NXS2 382 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 B4GALT7Q9UBV7 327 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 FREM3P0C091 2139 aa22.51■■□□□ 1.19
LIME1-206ENST00000487026 EXOC1LA0A1B0GW35 172 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 FOXO6A8MYZ6 492 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 GPX3P22352 226 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 GCAP28676 217 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 NRG3P56975 720 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 DUSP2Q05923 314 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 DUSP8Q13202 625 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 EXOSC7Q15024 291 aaKnown RBP22.5■■□□□ 1.19
LIME1-206ENST00000487026 NNATQ16517 81 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 GLE1Q53GS7 698 aaKnown RBP22.5■■□□□ 1.19
LIME1-206ENST00000487026 ULK2Q8IYT8 1036 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 ADCY4Q8NFM4 1077 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 MYRIPQ8NFW9 859 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 OR7G1Q8NGA0 311 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 GNRHR2Q96P88 292 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 C1QTNF3Q9BXJ4 246 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 ANGPTL4Q9BY76 406 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 NXF5Q9H1B4 397 aaKnown RBP22.5■■□□□ 1.19
LIME1-206ENST00000487026 TMEM216Q9P0N5 145 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 BCAP29Q9UHQ4 241 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 NFU1Q9UMS0 254 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 SNX6Q9UNH7 406 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 F8P00451 2351 aa22.5■■□□□ 1.19
LIME1-206ENST00000487026 ANKRD17O75179 2603 aaKnown RBP22.5■■□□□ 1.19
LIME1-206ENST00000487026 C15orf38-AP3S2A0A0A6YYH1 394 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 C1orf226A1L170 272 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 KDM4EB2RXH2 506 aaPredicted RBP22.49■■□□□ 1.19
LIME1-206ENST00000487026 GUCY1B2O75343 617 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 GABRA1P14867 456 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 CASP3P42574 277 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 DLX5P56178 289 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 CLCQ05315 142 aa22.49■■□□□ 1.19
LIME1-206ENST00000487026 PRICKLE4Q2TBC4 344 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms