RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TRABDQ9H4I3 376 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 BPIFA1Q9NP55 256 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TXLNGQ9NUQ3 528 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 KLHL28Q9NXS3 571 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 TAS2R7Q9NYW3 318 aa6.41□□□□□ -1.38
HDAC3-209ENST00000486618 LIMA1Q9UHB6 759 aaKnown RBP6.41□□□□□ -1.38
HDAC3-209ENST00000486618 CELSR1Q9NYQ6 3014 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TRGV8A0A0C4DH27 118 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 GLYATL1P3A0A0U1RQE8 302 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM210A6NLX4 147 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 C2orf74A8MZ97 194 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 ISM1B1AKI9 464 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 MYO1FO00160 1098 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 KCNK1O00180 336 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 WRBO00258 174 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CCL21O00585 134 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 PCDH17O14917 1159 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 PHGDHO43175 533 aaKnown RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 DLX3O60479 287 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A9O60656 530 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TRIM3O75382 744 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CDC123O75794 336 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 KRT36O76013 467 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CD48P09326 243 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 PIM1P11309 404 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A6P19224 532 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A1P22309 533 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A4P22310 534 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CPT2P23786 658 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 MMP11P24347 488 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 PTPN3P26045 913 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CD1BP29016 333 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 ALDH3A1P30838 453 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 LSP1P33241 339 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SPAM1P38567 509 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 ACTR3P61158 418 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SPIBQ01892 262 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 MYL5Q02045 173 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 GUCY1A3Q02108 690 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TEKQ02763 1124 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SLC25A11Q02978 314 aaKnown RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 RBPJQ06330 500 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 DPYSL3Q14195 570 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 GAMTQ14353 236 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 RPS6KA1Q15418 735 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TESK1Q15569 626 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 FAM83EQ2M2I3 478 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 NKAIN1Q4KMZ8 207 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 FNBP1LQ5T0N5 605 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 GPRC6AQ5T6X5 926 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 C1orf189Q5VU69 101 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 METTL2BQ6P1Q9 378 aaKnown RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 DUS1LQ6P1R4 473 aaKnown RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SARM1Q6SZW1 724 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM207Q6UWW9 146 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 GFRALQ6UXV0 394 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CDHR3Q6ZTQ4 885 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CCDC121Q6ZUS5 278 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 H1FNTQ75WM6 255 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 KDM8Q8N371 416 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 OR1N1Q8NGS0 311 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 OR2L2Q8NH16 312 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF670Q9BS34 389 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 NAA11Q9BSU3 229 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 NDC1Q9BTX1 674 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SF3B5Q9BWJ5 86 aaKnown RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 FAM192AQ9GZU8 254 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 LHPPQ9H008 270 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 RNF32Q9H0A6 362 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SLC25A51Q9H1U9 297 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 EPB41L4BQ9H329 900 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A7Q9HAW7 530 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A10Q9HAW8 530 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 UGT1A8Q9HAW9 530 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TBC1D23Q9NUY8 699 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 TAS2R10Q9NYW0 307 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 HACD3Q9P035 362 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 LEF1Q9UJU2 399 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-209ENST00000486618 FBXL4Q9UKA2 621 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CDYLQ9Y232 598 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 CSAG2Q9Y5P2 127 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 MAD1L1Q9Y6D9 718 aa6.4□□□□□ -1.38
HDAC3-209ENST00000486618 A0A0A6YYJ9 748 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 OR6C76A6NM76 312 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 SLCO1B7G3V0H7 640 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 BTN3A3O00478 584 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 BTN3A1O00481 513 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 AURKAO14965 403 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 KCNN4O15554 427 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 PTBP3O95758 552 aaKnown RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 LGI1O95970 557 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 MT-CYBP00156 380 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-209ENST00000486618 AK1P00568 194 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TK1P04183 234 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 HMGN1P05114 100 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 TUBBP07437 444 aa6.39□□□□□ -1.39
HDAC3-209ENST00000486618 UMODP07911 640 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms