RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PTGS2P35354 604 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 GSTM5P46439 218 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 NR0B1P51843 470 aaKnown RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 RPP38P78345 283 aaKnown RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 RPS6KA2Q15349 733 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CMPK2Q5EBM0 449 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 PRAMEF20Q5VT98 475 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 SLC22A10Q63ZE4 541 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ARHGAP11AQ6P4F7 1023 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 Q6ZPB1 254 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 FBXW8Q8N3Y1 598 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 FAM109AQ8N4B1 249 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF808Q8N4W9 903 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 OR10G3Q8NGC4 313 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 OR5M3Q8NGP4 307 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CHTF18Q8WVB6 975 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 EXOSC8Q96B26 276 aaKnown RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 APIPQ96GX9 242 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 JSRP1Q96MG2 331 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 C12orf65Q9H3J6 166 aaKnown RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 IL1RL2Q9HB29 575 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
CHMP3-208ENST00000486404 MKS1Q9NXB0 559 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
CHMP3-208ENST00000486404 CACNA1CQ13936 2221 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 PCNX1Q96RV3 2341 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 UBFD1O14562 309 aaKnown RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ZNHIT1O43257 154 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 PDE9AO76083 593 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 LRATO95237 230 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 CHEK2O96017 543 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 UROSP10746 265 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 DRD2P14416 443 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 COL8A1P27658 744 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 PIGAP37287 484 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 FOXA1P55317 472 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 SLC18A2Q05940 514 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 FUT7Q11130 342 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 PCLAFQ15004 111 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 NNATQ16517 81 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF791Q3KP31 576 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 SH2D5Q6ZV89 423 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 TRABD2AQ86V40 505 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 C10orf107Q8IVU9 208 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ADCY4Q8NFM4 1077 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 OR52N2Q8NGI0 321 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 FAM57AQ8TBR7 257 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 C16orf78Q8WTQ4 265 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ITLN2Q8WWU7 325 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 DIO2Q92813 273 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 CAVIN3Q969G5 261 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF597Q96LX8 424 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 SMC6Q96SB8 1091 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 DOHHQ9BU89 302 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 DEFB127Q9H1M4 99 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 LDAHQ9H6V9 325 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 EXO5Q9H790 373 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 MIEF1Q9NQG6 463 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 TUBA8Q9NY65 449 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 MAT2BQ9NZL9 334 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 CNIH4Q9P003 139 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 HEY2Q9UBP5 337 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 LGALS13Q9UHV8 139 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 CES1P1Q9UKY3 287 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 MEMO1Q9Y316 297 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 FIS1Q9Y3D6 152 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.88□□□□□ -0.51
CHMP3-208ENST00000486404 NINQ8N4C6 2090 aa11.88□□□□□ -0.51
CHMP3-208ENST00000486404 ATP6AP2A0A1C7CYW4 349 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ATP6AP2O75787 350 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 RSL1D1O76021 490 aaKnown RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 GPX3P22352 226 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 NTSP30990 170 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 DCTP40126 519 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 MAGEA5P43359 124 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 MASP1P48740 699 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PLCXD2Q0VAA5 305 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 EXOSC7Q15024 291 aaKnown RBP11.87□□□□□ -0.51
CHMP3-208ENST00000486404 LTB4RQ15722 352 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 TBCELQ5QJ74 424 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 CLEC6AQ6EIG7 209 aa11.87□□□□□ -0.51
CHMP3-208ENST00000486404 FAM180BQ6P0A1 224 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms