RNA–Protein interactions for RNA: ENST00000486388.5

UBP1-210, Transcript of upstream binding protein 1, human

TSL 3

Gene UBP1, Length 928 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBP1-210	ENST00000486388	PHF3	Q92576	2039 aa	Known RBP	4.37	□□□□□ -1.71
UBP1-210	ENST00000486388	ATP6AP2	A0A1C7CYW4	349 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	TUBAL3	A6NHL2	446 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ANKDD1B	A6NHY2	528 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388		A6NNC1	897 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SYT5	O00445	386 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CASK	O14936	926 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PROM1	O43490	865 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	HCN1	O60741	890 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ATP6AP2	O75787	350 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SERPINA6	P08185	405 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ZSCAN5DP	P0CG00	497 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ETS1	P14921	441 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	NPPB	P16860	134 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	TNNI3	P19429	210 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	TPSB2	P20231	275 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	BMP5	P22003	454 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	GSTM2	P28161	218 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	GCK	P35557	465 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SLC1A2	P43004	574 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	MAGEA5	P43359	124 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	RPL21	P46778	160 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ASCL1	P50553	236 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	HSD17B7	P56937	341 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	RAB8A	P61006	207 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ADAM8	P78325	824 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	OLR1	P78380	273 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	BTG2	P78543	158 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CTBP1	Q13363	440 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SERTAD2	Q14140	314 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ICAM4	Q14773	271 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	2e-18	■■■■■ 85.3
UBP1-210	ENST00000486388	TPSAB1	Q15661	275 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ELAVL1	Q15717	326 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	DEFB113	Q30KQ7	82 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	C1orf185	Q5T7R7	199 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	RIPPLY2	Q5TAB7	128 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SHE	Q5VZ18	495 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SLC22A10	Q63ZE4	541 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	TRIM40	Q6P9F5	258 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CENPU	Q71F23	418 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	TMPRSS11B	Q86T26	416 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CDC20B	Q86Y33	519 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	P3H2	Q8IVL5	708 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ZNF595	Q8IYB9	648 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PM20D2	Q8IYS1	436 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	KRT78	Q8N1N4	520 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	MIER2	Q8N344	545 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	APCDD1L	Q8NCL9	501 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	MORN4	Q8NDC4	146 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	OR14A16	Q8NHC5	309 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SLC22A8	Q8TCC7	542 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CD200R1	Q8TD46	325 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	UTP15	Q8TED0	518 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	EEF1AKMT1	Q8WVE0	214 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	CCT6B	Q92526	530 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	RNASE6	Q93091	150 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	NCLN	Q969V3	563 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	KIAA1191	Q96A73	305 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	LCOR	Q96JN0	433 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PDLIM2	Q96JY6	352 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ART5	Q96L15	291 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	RUNDC3B	Q96NL0	473 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SECISBP2	Q96T21	854 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	BAG1	Q99933	345 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	NPL	Q9BXD5	320 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SYNPO2L	Q9H987	977 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	IL1RL2	Q9HB29	575 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	XAB2	Q9HCS7	855 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PPAN	Q9NQ55	473 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PRTFDC1	Q9NRG1	225 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	MYOT	Q9UBF9	498 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	FBXO5	Q9UKT4	447 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PDE10A	Q9Y233	779 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	EIF3L	Q9Y262	564 aa	Known RBP	4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	PCDHGB3	Q9Y5G1	929 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388		X6R8D5	127 aa		4.36	□□□□□ -1.71
UBP1-210	ENST00000486388	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	IGKV3D-11	A0A0A0MRZ8	115 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388		A0A0G2JNJ9	132 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388		A0A1B0GVC2	190 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	NPEPPSL1	A6NEC2	478 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	CAPN14	A8MX76	684 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	AHRR	A9YTQ3	701 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388		G3V3Y1	287 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	WWP2	O00308	870 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	EEF1E1	O43324	174 aa	Known RBP	4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	ERI3	O43414	337 aa	Known RBP	4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	OR6B1	O95007	311 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	TTC4	O95801	387 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	GUCA1C	O95843	209 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	IGHG3	P01860	377 aa		4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	ENO2	P09104	434 aa	Predicted RBP	4.35	□□□□□ -1.71
UBP1-210	ENST00000486388	MLN	P12872	115 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms