RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ZNF615Q8N8J6 731 aa23.6■■□□□ 1.37
HLA-F-227ENST00000485513 ZNF597Q96LX8 424 aa23.6■■□□□ 1.37
HLA-F-227ENST00000485513 MRPL57Q9BQC6 102 aaKnown RBP23.6■■□□□ 1.37
HLA-F-227ENST00000485513 OR10A5Q9H207 317 aa23.6■■□□□ 1.37
HLA-F-227ENST00000485513 MRPL46Q9H2W6 279 aaKnown RBP23.6■■□□□ 1.37
HLA-F-227ENST00000485513 ZNF180Q9UJW8 692 aa23.6■■□□□ 1.37
HLA-F-227ENST00000485513 NPFFR2Q9Y5X5 522 aa23.6■■□□□ 1.37
HLA-F-227ENST00000485513 TRIM49D1C9J1S8 452 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 FAM47E-STBD1D6RA91 191 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 TRIM3O75382 744 aaPredicted RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 RPS17P08708 135 aaKnown RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 CPMP14384 443 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 NT5EP21589 574 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 GDF1P27539 372 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 ADH7P40394 386 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 TRPC1P48995 793 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 TMED10P49755 219 aaKnown RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 MAPK12P53778 367 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 FBXW4P57775 412 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 RPS27LQ71UM5 84 aaKnown RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 NOA1Q8NC60 698 aaKnown RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 UHMK1Q8TAS1 419 aaKnown RBP23.59■■□□□ 1.37
HLA-F-227ENST00000485513 DCAKDQ8WVC6 231 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 SLC12A4Q9UP95 1085 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 PCDHGB3Q9Y5G1 929 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 ARHGAP21Q5T5U3 1957 aa23.59■■□□□ 1.37
HLA-F-227ENST00000485513 GUCY1B2O75343 617 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 OTCP00480 354 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 PORP16435 677 aaPredicted RBP23.58■■□□□ 1.37
HLA-F-227ENST00000485513 NRG3P56975 720 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 COMMD6Q7Z4G1 85 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 MYRIPQ8NFW9 859 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 OR7G1Q8NGA0 311 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 TRPC4APQ8TEL6 797 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 ZNF483Q8TF39 744 aaPredicted RBP23.58■■□□□ 1.37
HLA-F-227ENST00000485513 ADIPOR1Q96A54 375 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 ZNF559Q9BR84 538 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 SLC24A3Q9HC58 644 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 FARSBQ9NSD9 589 aaKnown RBP23.58■■□□□ 1.37
HLA-F-227ENST00000485513 KCNN3Q9UGI6 736 aa23.58■■□□□ 1.37
HLA-F-227ENST00000485513 A0A1B0GTL3 188 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 RIPPLY2Q5TAB7 128 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 BICRALQ6AI39 1079 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 LETMD1Q6P1Q0 360 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 LIX1LQ8IVB5 337 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 ULK2Q8IYT8 1036 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 SPPL2AQ8TCT8 520 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 SELENOMQ8WWX9 145 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 RILPQ96NA2 401 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 SECISBP2Q96T21 854 aaKnown RBP23.57■■□□□ 1.36
HLA-F-227ENST00000485513 SNX6Q9UNH7 406 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 PCDHA9Q9Y5H5 950 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 HIVEP1P15822 2718 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 SPG11Q96JI7 2443 aa23.57■■□□□ 1.36
HLA-F-227ENST00000485513 EXPH5Q8NEV8 1989 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 A0A087WUV0 522 aaPredicted RBP23.56■■□□□ 1.36
HLA-F-227ENST00000485513 C1orf226A1L170 272 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 GOLGA6L10A6NI86 522 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 A8MT66 165 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 PPP6CO00743 305 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 SNX4O95219 450 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 PDYNP01213 254 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 TSPAN8P19075 237 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 ECHS1P30084 290 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 DEKP35659 375 aaKnown RBP23.56■■□□□ 1.36
HLA-F-227ENST00000485513 CDH13P55290 713 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 RPP38P78345 283 aaKnown RBP23.56■■□□□ 1.36
HLA-F-227ENST00000485513 SLC25A35Q3KQZ1 300 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 CES4AQ5XG92 561 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 SLC48A1Q6P1K1 146 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 PRR22Q8IZ63 422 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 VWA5B2Q8N398 1253 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 MNS1Q8NEH6 495 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 C17orf47Q8NEP4 570 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 ZNF592Q92610 1267 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 C1QTNF3Q9BXJ4 246 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 ANGPTL4Q9BY76 406 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 BRF2Q9HAW0 419 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 CES1P1Q9UKY3 287 aa23.56■■□□□ 1.36
HLA-F-227ENST00000485513 C15orf38-AP3S2A0A0A6YYH1 394 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 SNRPAP09012 282 aaKnown RBP23.55■■□□□ 1.36
HLA-F-227ENST00000485513 SBK3P0C264 359 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 S1PR1P21453 382 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 MASP1P48740 699 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 GALNT1Q10472 559 aaPredicted RBP23.55■■□□□ 1.36
HLA-F-227ENST00000485513 DUSP8Q13202 625 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 MYBPHQ13203 477 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 WDR53Q7Z5U6 358 aaPredicted RBP23.55■■□□□ 1.36
HLA-F-227ENST00000485513 PACS2Q86VP3 889 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 NMRK1Q9NWW6 199 aa23.55■■□□□ 1.36
HLA-F-227ENST00000485513 ERAL1O75616 437 aaKnown RBP23.54■■□□□ 1.36
HLA-F-227ENST00000485513 TRAPPC6AO75865 159 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 KRT15P19012 456 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 GPX3P22352 226 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 ABCD3P28288 659 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 TESK1Q15569 626 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 GLE1Q53GS7 698 aaKnown RBP23.54■■□□□ 1.36
HLA-F-227ENST00000485513 TEX35Q5T0J7 233 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 TMEM200AQ86VY9 491 aa23.54■■□□□ 1.36
HLA-F-227ENST00000485513 MMP21Q8N119 569 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms