RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NINJ2Q9NZG7 142 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 C15orf38-AP3S2A0A0A6YYH1 394 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 STX16-NPEPL1H3BU86 382 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 STX16O14662 325 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 DIAPH2O60879 1101 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 TRAPPC6AO75865 159 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 LRATO95237 230 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 ALDOAP04075 364 aaKnown RBP12.18□□□□□ -0.46
UBA3-210ENST00000485424 KLK1P06870 262 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 GLI4P10075 376 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 DNAJA1P31689 397 aaKnown RBP12.18□□□□□ -0.46
UBA3-210ENST00000485424 TRPC1P48995 793 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 MAPK12P53778 367 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 RPS6KA2Q15349 733 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 SF3B4Q15427 424 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBA3-210ENST00000485424 NTRK2Q16620 822 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 C10orf62Q5T681 223 aaPredicted RBP12.18□□□□□ -0.46
UBA3-210ENST00000485424 FRG2Q64ET8 278 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 MILR1Q7Z6M3 343 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 NEIL3Q8TAT5 605 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 TP53INP1Q96A56 240 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 FRG2BQ96QU4 278 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 NTMT1Q9BV86 223 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 BRINP2Q9C0B6 783 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 XPR1Q9UBH6 696 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 SLC12A4Q9UP95 1085 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 CFL2Q9Y281 166 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 NPFFR2Q9Y5X5 522 aa12.18□□□□□ -0.46
UBA3-210ENST00000485424 A0A0G2JNJ9 132 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 HMX2A2RU54 273 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 WASHC1A8K0Z3 465 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 OR7A17O14581 309 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 COL6A2P12110 1019 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 CNTFP26441 200 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SSTR4P31391 388 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 XKP51811 444 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SLC25A35Q3KQZ1 300 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SGO1Q5FBB7 561 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 PLD6Q8N2A8 252 aaKnown RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 OR52B6Q8NGF0 335 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ZNF592Q92610 1267 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 PAFAH2Q99487 392 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 FMO2Q99518 471 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 OR10A5Q9H207 317 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SLC6A15Q9H2J7 730 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 CDC42EP4Q9H3Q1 356 aaKnown RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 SH2D2AQ9NP31 389 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ACKR4Q9NPB9 350 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ZDHHC18Q9NUE0 388 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ZNF358Q9NW07 568 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 NMRK1Q9NWW6 199 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 TEX10Q9NXF1 929 aaPredicted RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 Q9UFV3 132 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 BCAP29Q9UHQ4 241 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 ADAM29Q9UKF5 820 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 PCTPQ9UKL6 214 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 PSME2Q9UL46 239 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 SNX6Q9UNH7 406 aa12.17□□□□□ -0.46
UBA3-210ENST00000485424 CHCHD2Q9Y6H1 151 aaPredicted RBP12.17□□□□□ -0.46
UBA3-210ENST00000485424 C1orf226A1L170 272 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PGRMC2O15173 223 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 CDH16O75309 829 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 ERAL1O75616 437 aaKnown RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 SNX4O95219 450 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 ESRRBO95718 433 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 OTCP00480 354 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 RFPL3SP0C7P2 107 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 GCKP35557 465 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PEX19P40855 299 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 ALDH9A1P49189 494 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 FBXW4P57775 412 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 HSPB2Q16082 182 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 LGSNQ5TDP6 509 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 RTL6Q6ICC9 239 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 PM20D2Q8IYS1 436 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 LRRC25Q8N386 305 aaPredicted RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 OR7G1Q8NGA0 311 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 OR4F6Q8NGB9 312 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 SELENOMQ8WWX9 145 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 GPR78Q96P69 363 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 FAIM2Q9BWQ8 316 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 MRPL1Q9BYD6 325 aaKnown RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
UBA3-210ENST00000485424 METTL7AQ9H8H3 244 aa12.16□□□□□ -0.46
UBA3-210ENST00000485424 CXorf21Q9HAI6 301 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms