RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CDK9P50750 372 aaKnown RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 XKP51811 444 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 NRG3P56975 720 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CRYZQ08257 329 aaKnown RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 MAP4K2Q12851 820 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 NHSL2Q5HYW2 709 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 SEM1Q6ZVN7 128 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 DIO2Q92813 273 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 C1QTNF3Q9BXJ4 246 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 UBQLN3Q9H347 655 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 MTRF1LQ9UGC7 380 aaKnown RBP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 CFL2Q9Y281 166 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 PCDHA9Q9Y5H5 950 aa10.51□□□□□ -0.73
SCFD1-206ENST00000484733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
SCFD1-206ENST00000484733 FAM221AA4D161 298 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 KLK1P06870 262 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 RPS17P08708 135 aaKnown RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 PORP16435 677 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 GDF1P27539 372 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 IFT88Q13099 833 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 DUSP8Q13202 625 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 MYBPHQ13203 477 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 C6orf163Q5TEZ5 329 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 TAOK1Q7L7X3 1001 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 LACC1Q8IV20 430 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 PM20D2Q8IYS1 436 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 CDK15Q96Q40 435 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 PRDM14Q9GZV8 571 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 FETUBQ9UGM5 382 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF639Q9UID6 485 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF180Q9UJW8 692 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 C15orf41Q9Y2V0 281 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 EXPH5Q8NEV8 1989 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 A0A1W2PS29 197 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 C1orf226A1L170 272 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 GBAP04062 536 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 INHBAP08476 426 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 GPX3P22352 226 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 FBXW4P57775 412 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 TRA2BP62995 288 aaKnown RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 MGAT2Q10469 447 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ACSF3Q4G176 576 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 CCNYL2Q5T2Q4 361 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 FNDC7Q5VTL7 733 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 VASNQ6EMK4 673 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 SLC48A1Q6P1K1 146 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 MILR1Q7Z6M3 343 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 MMGT1Q8N4V1 131 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF483Q8TF39 744 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 NINJ1Q92982 152 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 PHF21BQ96EK2 531 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 JSRP1Q96MG2 331 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 TIMP4Q99727 224 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 MRPL57Q9BQC6 102 aaKnown RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 BRF2Q9HAW0 419 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ALKBH4Q9NXW9 302 aa10.5□□□□□ -0.73
SCFD1-206ENST00000484733 FOXD3Q9UJU5 478 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-206ENST00000484733 ZWINTO95229 277 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 LRATO95237 230 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CASP3P42574 277 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TRPC1P48995 793 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 PRICKLE4Q2TBC4 344 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NUP54Q7Z3B4 507 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TMEM200AQ86VY9 491 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 OR4F6Q8NGB9 312 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 HSPBAP1Q96EW2 488 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 RILPQ96NA2 401 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NSUN5Q96P11 429 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CDC42EP4Q9H3Q1 356 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 XPR1Q9UBH6 696 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 INTS1Q8N201 2190 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 GOLGA6L10A6NI86 522 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CD8B2A6NJW9 211 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CTAG2O75638 210 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 PPM1BO75688 479 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 KRT38O76015 456 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 OTCP00480 354 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ATP1B1P05026 303 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ABCB1P08183 1280 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 RHOXF2BP0C7M4 288 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 CSNK2A2P19784 350 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NT5EP21589 574 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ABCD3P28288 659 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 DNAJA1P31689 397 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 ASCL1P50553 236 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 MAPK12P53778 367 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 GALNT1Q10472 559 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 WHAMMP3Q1A5X7 153 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 UBAP2Q5T6F2 1119 aaKnown RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 NSUN5P2Q63ZY6 315 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 POMZP3Q6PJE2 187 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TMEM64Q6YI46 380 aa10.49□□□□□ -0.73
SCFD1-206ENST00000484733 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
SCFD1-206ENST00000484733 TMEM151AQ8N4L1 468 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms