RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZFP36L2P47974 494 aaKnown RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 LEPRP48357 1165 aaKnown RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 SGSHP51688 502 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 RPL27P61353 136 aaKnown RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 EXOSC2Q13868 293 aaKnown RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 TATDN3Q17R31 274 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 HKDC1Q2TB90 917 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF699Q32M78 642 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 STEAP1BQ6NZ63 245 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 WASH2PQ6VEQ5 465 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 CENPUQ71F23 418 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF771Q7L3S4 317 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 LRRC70Q7Z2Q7 622 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 OR4N5Q8IXE1 308 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 CCDC36Q8IYA8 594 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 LINC00518Q8N0U6 118 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 TMEM178AQ8NBL3 297 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 OR5AU1Q8NGC0 362 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 OR13C2Q8NGS9 318 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 OR6F1Q8NGZ6 308 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 MAPK15Q8TD08 544 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 SMAP2Q8WU79 429 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 OSTF1Q92882 214 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 CAPNS2Q96L46 248 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 SENP8Q96LD8 212 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 CASD1Q96PB1 797 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 CCT7Q99832 543 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 TBCDQ9BTW9 1192 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 KAT8Q9H7Z6 458 aaKnown RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF334Q9HCZ1 680 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 TRPV5Q9NQA5 729 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 ZNF71Q9NQZ8 489 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 GDAP2Q9NXN4 497 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 C6orf203Q9P0P8 240 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-211ENST00000484581 IKZF3Q9UKT9 509 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
VPS13A-211ENST00000484581 LOC390937A0A1W2PQ73 354 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 A0A1W2PR80 420 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 OR5H15A6NDH6 313 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 A8MU76 341 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 PPIAL4DF5H284 164 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 P2RY10O00398 339 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 CLDN5O00501 218 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 ALOX15BO15296 676 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 CFLARO15519 480 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 TSC22D2O75157 780 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 CEACAM4O75871 244 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 MBD3O95983 291 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 GSTA1P08263 222 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 FGF3P11487 239 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 CHI3L1P36222 383 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 MTIF2P46199 727 aaKnown RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 DHPSP49366 369 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 RGS4P49798 205 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 CBX1P83916 185 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 FILIP1LQ4L180 1135 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 P4HA3Q7Z4N8 544 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 EFCAB13Q8IY85 973 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 PYROXD2Q8N2H3 581 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 EIF1ADQ8N9N8 165 aaKnown RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 RELL2Q8NC24 303 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 DDHD1Q8NEL9 900 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 NFAM1Q8NET5 270 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 OR9Q2Q8NGE9 314 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 OR6S1Q8NH40 331 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 LMO3Q8TAP4 145 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 AZIN2Q96A70 460 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 TUBGCP3Q96CW5 907 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 LRR1Q96L50 414 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 UHRF2Q96PU4 802 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 PSKH2Q96QS6 385 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 ZBTB18Q99592 522 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 FUCA2Q9BTY2 467 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 EDEM2Q9BV94 578 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 HOXD1Q9GZZ0 328 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 MTHFD2LQ9H903 347 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 LPAR2Q9HBW0 351 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 FANCFQ9NPI8 374 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 TEX10Q9NXF1 929 aaPredicted RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 MDFICQ9P1T7 246 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 TUBGCP4Q9UGJ1 667 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 FZR1Q9UM11 496 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 MRPS33Q9Y291 106 aaKnown RBP3.88□□□□□ -1.79
VPS13A-211ENST00000484581 ZHX2Q9Y6X8 837 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 KIF16BQ96L93 1317 aa3.88□□□□□ -1.79
VPS13A-211ENST00000484581 SCN5AQ14524 2016 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 IQCMA0A1B0GVH7 501 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 GLTPD2A6NH11 291 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 FBLL1A6NHQ2 334 aaKnown RBP3.87□□□□□ -1.79
VPS13A-211ENST00000484581 LRRC30A6NM36 301 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 SLCO1B7G3V0H7 640 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 ACOT8O14734 319 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 JAK2O60674 1132 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 MTRF1O75570 445 aaKnown RBP3.87□□□□□ -1.79
VPS13A-211ENST00000484581 UFL1O94874 794 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 ANP32DO95626 131 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 PRSS1P07477 247 aa3.87□□□□□ -1.79
VPS13A-211ENST00000484581 FHP07954 510 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms