RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CES1P1Q9UKY3 287 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 SNX6Q9UNH7 406 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 SLC12A4Q9UP95 1085 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 PCDHA9Q9Y5H5 950 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 FAM215AQ9Y5M1 114 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 NPFFR2Q9Y5X5 522 aa8.67□□□□□ -1.02
NUP50-215ENST00000484186 GOLGA6L10A6NI86 522 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 LRRC3CA6NJW4 275 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TRIM3O75382 744 aaPredicted RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 OR4F21O95013 312 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 LRATO95237 230 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 IGFBP2P18065 325 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TSPAN8P19075 237 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 POU3F2P20265 443 aaPredicted RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 TAC1P20366 129 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 ENDOUP21128 410 aaKnown RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 S1PR1P21453 382 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 HSD17B3P37058 310 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 MAPK12P53778 367 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 CDH13P55290 713 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 NRG3P56975 720 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 FBXW4P57775 412 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 CLCQ05315 142 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 GALNT1Q10472 559 aaPredicted RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 TEX35Q5T0J7 233 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 C1orf185Q5T7R7 199 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 SLC48A1Q6P1K1 146 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TMEM64Q6YI46 380 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TIFABQ6ZNK6 161 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 COMMD6Q7Z4G1 85 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 DMRTC2Q8IXT2 367 aaPredicted RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 C17orf47Q8NEP4 570 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 OR7G1Q8NGA0 311 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 SPPL2AQ8TCT8 520 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TM4SF18Q96CE8 201 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 MTBPQ96DY7 904 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 SECISBP2Q96T21 854 aaKnown RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 DOHHQ9BU89 302 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 SPRR3Q9UBC9 169 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 B4GALT7Q9UBV7 327 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 TRPS1Q9UHF7 1281 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 PSME2Q9UL46 239 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 PCDHGB3Q9Y5G1 929 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 PHF3Q92576 2039 aaKnown RBP8.66□□□□□ -1.02
NUP50-215ENST00000484186 FBN2P35556 2912 aa8.66□□□□□ -1.02
NUP50-215ENST00000484186 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 EXOC1LA0A1B0GW35 172 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 FAM47E-STBD1D6RA91 191 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ERAL1O75616 437 aaKnown RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 SNX4O95219 450 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ABHD2P08910 425 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 CSNK2A2P19784 350 aaPredicted RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 GDF1P27539 372 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 GCAP28676 217 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 FEN1P39748 380 aaKnown RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 ADH7P40394 386 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 CASP3P42574 277 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 TRPC1P48995 793 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 TMED10P49755 219 aaKnown RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 TRA2BP62995 288 aaKnown RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 RPP38P78345 283 aaKnown RBP8.65□□□□□ -1.02
NUP50-215ENST00000484186 MGAT2Q10469 447 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 MAP4K2Q12851 820 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 RPS6KA2Q15349 733 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 PRICKLE4Q2TBC4 344 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ZNF678Q5SXM1 525 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 BICRALQ6AI39 1079 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 FAM111BQ6SJ93 734 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 LIX1LQ8IVB5 337 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 CLYBLQ8N0X4 340 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 MMP21Q8N119 569 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 VWA5B2Q8N398 1253 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 LIX1Q8N485 282 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ZNF597Q96LX8 424 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 FAIM2Q9BWQ8 316 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ANGPTL4Q9BY76 406 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 SLC6A15Q9H2J7 730 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 TMEM216Q9P0N5 145 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 VPS29Q9UBQ0 182 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 Q9UFV3 132 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ZNF639Q9UID6 485 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 ITGB1BP2Q9UKP3 347 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 NFU1Q9UMS0 254 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 CFL2Q9Y281 166 aa8.65□□□□□ -1.02
NUP50-215ENST00000484186 PDZD2O15018 2839 aa8.65□□□□□ -1.03
NUP50-215ENST00000484186 NINQ8N4C6 2090 aa8.65□□□□□ -1.03
NUP50-215ENST00000484186 AHRRA9YTQ3 701 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 MANBAO00462 879 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 DLX3O60479 287 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 CDH16O75309 829 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 TRAPPC6AO75865 159 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 SUPT7LO94864 414 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 KRT6AP02538 564 aa8.64□□□□□ -1.03
NUP50-215ENST00000484186 KRT6BP04259 564 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms