RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 FGD2Q7Z6J4 655 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 RPS19BP1Q86WX3 136 aaKnown RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 NUDCD3Q8IVD9 361 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 CHERPQ8IWX8 916 aaKnown RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 GPALPP1Q8IXQ4 340 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 KIF2BQ8N4N8 673 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 C1orf52Q8N6N3 182 aaKnown RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 OR5L2Q8NGL0 311 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 PTPMT1Q8WUK0 201 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 DEFB126Q9BYW3 111 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 C12orf65Q9H3J6 166 aaKnown RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 TRIM45Q9H8W5 580 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 VIPAS39Q9H9C1 493 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 PNO1Q9NRX1 252 aaKnown RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 EHD3Q9NZN3 535 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 COPS7AQ9UBW8 275 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 TMED5Q9Y3A6 229 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 TIMM22Q9Y584 194 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 PCDHA9Q9Y5H5 950 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 CCDC168Q8NDH2 2452 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 SCN2AQ99250 2005 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 GNG14A0A1W2PPG7 69 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 OR6C76A6NM76 312 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 C17orf105B2RV13 164 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TGFBR3LH3BV60 316 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TFECO14948 347 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 PCDH7O60245 1069 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 NME2P1O60361 137 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 PDE9AO76083 593 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 SLITRK5O94991 958 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 SERPINE1P05121 402 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 CREB1P16220 341 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 DDX5P17844 614 aaKnown RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TNNI3P19429 210 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 NME2P22392 152 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TRHRP34981 398 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 CYB561P49447 251 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 MEOX1P50221 254 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 FOXA1P55317 472 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF763Q0D2J5 394 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 ARL13AQ5H913 290 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TCHHL1Q5QJ38 904 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 SLC48A1Q6P1K1 146 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 HSDL2Q6YN16 418 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 HDXQ7Z353 690 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 CLNKQ7Z7G1 428 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 OR4K14Q8NGD5 310 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 PPP1R14CQ8TAE6 165 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 NUBPLQ8TB37 319 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 FAM57AQ8TBR7 257 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 NRGNQ92686 78 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 NCLNQ969V3 563 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TMEM125Q96AQ2 219 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TM4SF18Q96CE8 201 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TLCD1Q96CP7 247 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 ERP27Q96DN0 273 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF764Q96H86 408 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-213ENST00000484112 FBXL20Q96IG2 436 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 KCNA7Q96RP8 456 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 ZNF559Q9BR84 538 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TMBIM4Q9HC24 238 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 TRAF6Q9Y4K3 522 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 DNAJC15Q9Y5T4 150 aa9.26□□□□□ -0.93
CPSF4-213ENST00000484112 HS6ST1O60243 411 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 OR10H2O60403 315 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 GBAP04062 536 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 IGKV3-11P04433 115 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 ATP1B1P05026 303 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 H2AFXP16104 143 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 PCSK2P16519 638 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 HTR6P50406 440 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 MLF1P58340 268 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 PSPHP78330 225 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 HMGCS1Q01581 520 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 MYBPHQ13203 477 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 CEBPEQ15744 281 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 SPDYAQ5MJ70 313 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 C6orf163Q5TEZ5 329 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 AGBL2Q5U5Z8 902 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TMEM211Q6ICI0 200 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 SULF2Q8IWU5 870 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 DND1Q8IYX4 353 aaKnown RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 LRRC34Q8IZ02 419 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 MARVELD2Q8N4S9 558 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 ACBD4Q8NC06 268 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 OR7G1Q8NGA0 311 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 SLC2A12Q8TD20 617 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 RND1Q92730 232 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 RIT1Q92963 219 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 APIPQ96GX9 242 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 HBEGFQ99075 208 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 TREX2Q9BQ50 279 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-213ENST00000484112 MECRQ9BV79 373 aa9.25□□□□□ -0.93
CPSF4-213ENST00000484112 KCNK9Q9NPC2 374 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms