RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NPFFR2Q9Y5X5 522 aa16.52■□□□□ 0.24
ATG4B-221ENST00000483778 OR6C76A6NM76 312 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 SEMA3DO95025 777 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 CDH13P55290 713 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 METTL4Q8N3J2 472 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 NAXEQ8NCW5 288 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 TNIP2Q8NFZ5 429 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 OR4K14Q8NGD5 310 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 SPPL2AQ8TCT8 520 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 DCAKDQ8WVC6 231 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 ISL2Q96A47 359 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 TP53INP1Q96A56 240 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 OR10A5Q9H207 317 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 XPR1Q9UBH6 696 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 SLC6A5Q9Y345 797 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
ATG4B-221ENST00000483778 ABCA4P78363 2273 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 C2orf72A6NCS6 295 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 FOXO6A8MYZ6 492 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 POC1B-GALNT4F8VUJ3 575 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 PDYNP01213 254 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 CPMP14384 443 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 GDF1P27539 372 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 GALNT1Q10472 559 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 MYBPHQ13203 477 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 EXOSC7Q15024 291 aaKnown RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 CCNYL2Q5T2Q4 361 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 LETMD1Q6P1Q0 360 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 METTL2BQ6P1Q9 378 aaKnown RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 POMZP3Q6PJE2 187 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 SPNS3Q6ZMD2 512 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 WDR53Q7Z5U6 358 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 RELL1Q8IUW5 271 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 RELL2Q8NC24 303 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 TM4SF18Q96CE8 201 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 RILPQ96NA2 401 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 PAFAH2Q99487 392 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 TIMP4Q99727 224 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 ANGPTL4Q9BY76 406 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 NXF5Q9H1B4 397 aaKnown RBP16.5■□□□□ 0.23
ATG4B-221ENST00000483778 LIME1Q9H400 295 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 KCNN3Q9UGI6 736 aa16.5■□□□□ 0.23
ATG4B-221ENST00000483778 ANKHD1Q8IWZ3 2542 aaKnown RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 STX16-NPEPL1H3BU86 382 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 STX16O14662 325 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 NME6O75414 186 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 RBP1P09455 135 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 PORP16435 677 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 NT5EP21589 574 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 ECHS1P30084 290 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 PHBP35232 272 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 FEN1P39748 380 aaKnown RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 CASP3P42574 277 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 CRYZQ08257 329 aaKnown RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TBL3Q12788 808 aaKnown RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 NNATQ16517 81 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 EIPR1Q53HC9 387 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TCHHL1Q5QJ38 904 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 DCST1Q5T197 706 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 RIPPLY2Q5TAB7 128 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 COMMD6Q7Z4G1 85 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TMEM200AQ86VY9 491 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 GALNT12Q8IXK2 581 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 DND1Q8IYX4 353 aaKnown RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 TAGAPQ8N103 731 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 ADCY4Q8NFM4 1077 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 ZNF483Q8TF39 744 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-221ENST00000483778 HBEGFQ99075 208 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 UBQLN3Q9H347 655 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 QPCTLQ9NXS2 382 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 SLC12A4Q9UP95 1085 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 PCDHA9Q9Y5H5 950 aa16.49■□□□□ 0.23
ATG4B-221ENST00000483778 ACANP16112 2415 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 C15orf38-AP3S2A0A0A6YYH1 394 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 TRAPPC6AO75865 159 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ABCB1P08183 1280 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-221ENST00000483778 INHBAP08476 426 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 RPS17P08708 135 aaKnown RBP16.48■□□□□ 0.23
ATG4B-221ENST00000483778 GABRA1P14867 456 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 CHN1P15882 459 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 GPX3P22352 226 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ABCD3P28288 659 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 CDK9P50750 372 aaKnown RBP16.48■□□□□ 0.23
ATG4B-221ENST00000483778 RPS6KA2Q15349 733 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 PRICKLE4Q2TBC4 344 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 CES4AQ5XG92 561 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 HLA-DQA1Q5Y7H0 255 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ARSKQ6UWY0 536 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ZZZ3Q8IYH5 903 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 CLYBLQ8N0X4 340 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 MMGT1Q8N4V1 131 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ZNF597Q96LX8 424 aa16.48■□□□□ 0.23
ATG4B-221ENST00000483778 ANKRA2Q9H9E1 313 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms