RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PARP8Q8N3A8 854 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LRRC17Q8N6Y2 441 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 OR11H4Q8NGC9 324 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 OR4A15Q8NGL6 344 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 OR13J1Q8NGT2 312 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RAET1EQ8TD07 263 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 FCGR1BQ92637 280 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PROX1Q92786 737 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PYCR2Q96C36 320 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RNF183Q96D59 192 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LRRC39Q96DD0 335 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 WBP1Q96G27 269 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CHRDL1Q9BU40 450 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 FTHL17Q9BXU8 183 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LRRCC1Q9C099 1032 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 C5orf66Q9H5L9 145 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ELOVL3Q9HB03 270 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PPANQ9NQ55 473 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 DDX28Q9NUL7 540 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 FAM120CQ9NX05 1096 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 STK38LQ9Y2H1 464 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RNF114Q9Y508 228 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ESYT2A0FGR8 921 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PIPSLA2A3N6 862 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ANTXRLA6NF34 631 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 IQCF5A8MTL0 148 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 BECN2A8MW95 431 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 NPIPA2E9PIF3 369 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 GOLGA8SH3BPF8 625 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 DLGAP1O14490 977 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 HSPB6O14558 160 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CDH16O75309 829 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CT62P0C5K7 136 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 F3P13726 295 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CYP3A5P20815 502 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 NT5EP21589 574 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PPP3CCP48454 512 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TPMTP51580 245 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LIMK2P53671 638 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 PRKD1Q15139 912 aaPredicted RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 STX1AQ16623 288 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SLC25A53Q5H9E4 307 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 C6orf10Q5SRN2 563 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SLC22A10Q63ZE4 541 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 NIPAL3Q6P499 406 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TPRG1Q6ZUI0 275 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 Q75L30 129 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RNF130Q86XS8 419 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LDLRAD3Q86YD5 345 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CBWD2Q8IUF1 395 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TCAIMQ8N3R3 496 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LCORLQ8N3X6 602 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 ZNF843Q8N446 348 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 LNX2Q8N448 690 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 HORMAD2Q8N7B1 307 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 POC1AQ8NBT0 407 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 RP9Q8TA86 221 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 HCAR2Q8TDS4 363 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 COQ2Q96H96 371 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TECTBQ96PL2 329 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 C17orf62Q9BQA9 187 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TRMT61BQ9BVS5 477 aaKnown RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 SSBP3Q9BWW4 388 aaPredicted RBP3.03□□□□□ -1.92
SMC6-208ENST00000481708 SLC26A1Q9H2B4 701 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TREM1Q9NP99 234 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 TBC1D24Q9ULP9 559 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SCML1Q9UN30 329 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 GAB2Q9UQC2 676 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 SHROOM3Q8TF72 1996 aa3.03□□□□□ -1.92
SMC6-208ENST00000481708 CEP290O15078 2479 aa3.03□□□□□ -1.93
SMC6-208ENST00000481708 TRAV26-1A0A087WT03 109 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 LOC100506127A0A0U1RQW1 187 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 TYW5A2RUC4 315 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 SMIM22K7EJ46 135 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 GMNNO75496 209 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SORBS2O94875 1100 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 CHRM5P08912 532 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 RRASP10301 218 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 PNMTP11086 282 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 UGT1A1P22309 533 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 LAP3P28838 519 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 ADORA1P30542 326 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 RPS19P39019 145 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 NAMPTP43490 491 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 RGRP47804 291 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 FOXM1Q08050 763 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 DECR1Q16698 335 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 Q3ZCU0 254 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 BEX5Q5H9J7 111 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 MFSD14CQ5VZR4 134 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 LIPJQ5W064 366 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 TTC19Q6DKK2 380 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 DUS1LQ6P1R4 473 aaKnown RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 DHDDSQ86SQ9 333 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SFTPA1Q8IWL2 248 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 MMD2Q8IY49 270 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 SLC38A6Q8IZM9 456 aa3.02□□□□□ -1.93
SMC6-208ENST00000481708 GTPBP8Q8N3Z3 284 aaPredicted RBP3.02□□□□□ -1.93
SMC6-208ENST00000481708 KLHDC1Q8N7A1 406 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms