RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TMEM251Q8N6I4 163 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ZNF321PQ8N8H1 164 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ZNF441Q8N8Z8 693 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 FAM76AQ8TAV0 307 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 METTL6Q8TCB7 284 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 DIO2Q92813 273 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 SDCCAG3Q96C92 435 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 IQCGQ9H095 443 aaKnown RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 KCNJ16Q9NPI9 418 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ZNF358Q9NW07 568 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 SENP1Q9P0U3 644 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ACAD8Q9UKU7 415 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 GRID1Q9ULK0 1009 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 CHCHD2Q9Y6H1 151 aaPredicted RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 GNG14A0A1W2PPG7 69 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 NADKO95544 446 aaPredicted RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 GBAP04062 536 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 MPIP34949 423 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 ST13P50502 369 aaKnown RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 GALNT1Q10472 559 aaPredicted RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 FOXO1Q12778 655 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 GXYLT1Q4G148 440 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 CFAP157Q5JU67 520 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 SLC30A6Q6NXT4 461 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 C16orf47Q6ZP98 133 aaPredicted RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 AMER2Q8N7J2 671 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 CDYL2Q8N8U2 506 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 OR10G3Q8NGC4 313 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 LILRB4Q8NHJ6 448 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 ZNF675Q8TD23 568 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 SREK1Q8WXA9 508 aaKnown RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 TMCO6Q96DC7 493 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 TMEM41AQ96HV5 264 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 NSUN5Q96P11 429 aaKnown RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 TMEM237Q96Q45 408 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 BRINP2Q9C0B6 783 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 DEFB127Q9H1M4 99 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 SIRT5Q9NXA8 310 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 TUBA8Q9NY65 449 aaPredicted RBP10.54□□□□□ -0.72
CCM2-213ENST00000480658 UTS2RQ9UKP6 389 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 NPFFR2Q9Y5X5 522 aa10.54□□□□□ -0.72
CCM2-213ENST00000480658 TEX15Q9BXT5 2789 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 ATP6AP2A0A1C7CYW4 349 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 HSPB2A8KAH6 182 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 NPIPA2E9PIF3 369 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 NPIPA3F8WFD2 350 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 MANBAO00462 879 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 ADAM10O14672 748 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 PGRMC2O15173 223 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 PCDH7O60245 1069 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 COQ9O75208 318 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 PRKRAO75569 313 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 ERAL1O75616 437 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 ATP6AP2O75787 350 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 PDE9AO76083 593 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 OR4F21O95013 312 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 GDF1P27539 372 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 KRT20P35900 424 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 DNASE1L1P49184 302 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 NR0B1P51843 470 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 CDH13P55290 713 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 ZNF763Q0D2J5 394 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 HSPB2Q16082 182 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 IMPG1Q17R60 797 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 PRICKLE4Q2TBC4 344 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 SLC25A35Q3KQZ1 300 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 SGO1Q5FBB7 561 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 IKBIPQ70UQ0 350 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 NUP54Q7Z3B4 507 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 FGD2Q7Z6J4 655 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 RIBC1Q8N443 379 aaPredicted RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 C1orf52Q8N6N3 182 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 ZNF615Q8N8J6 731 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 UHMK1Q8TAS1 419 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 NEIL3Q8TAT5 605 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 SPPL2AQ8TCT8 520 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 LCORQ96JN0 433 aaPredicted RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 RHOXF2Q9BQY4 288 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 TRMOQ9BU70 441 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 ENKD1Q9H0I2 346 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 MIEF1Q9NQG6 463 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 RRAGDQ9NQL2 400 aaPredicted RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 PFDN4Q9NQP4 134 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 TAS2R9Q9NYW1 312 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 TMEM216Q9P0N5 145 aa10.53□□□□□ -0.72
CCM2-213ENST00000480658 MRTO4Q9UKD2 239 aaKnown RBP10.53□□□□□ -0.72
CCM2-213ENST00000480658 ZGRF1Q86YA3 2104 aa10.52□□□□□ -0.72
CCM2-213ENST00000480658 MYOCOSA0A1B0GUC4 107 aa10.52□□□□□ -0.73
CCM2-213ENST00000480658 FRG2CA6NGY1 282 aa10.52□□□□□ -0.73
CCM2-213ENST00000480658 AHRRA9YTQ3 701 aa10.52□□□□□ -0.73
CCM2-213ENST00000480658 HRKO00198 91 aa10.52□□□□□ -0.73
CCM2-213ENST00000480658 DLX3O60479 287 aa10.52□□□□□ -0.73
CCM2-213ENST00000480658 TRIM3O75382 744 aaPredicted RBP10.52□□□□□ -0.73
CCM2-213ENST00000480658 PPM1BO75688 479 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms