RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 MSX2P35548 267 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 CHI3L1P36222 383 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 CCT3P49368 545 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 ST13P50502 369 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 IRX1P78414 480 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 SELPLGQ14242 412 aa6□□□□□ -1.45
HERC4-210ENST00000480158 RTP5Q14D33 572 aa6□□□□□ -1.45
HERC4-210ENST00000480158 ATP1A1-AS1Q5TC04 95 aa6□□□□□ -1.45
HERC4-210ENST00000480158 DLEU7Q6UYE1 221 aa6□□□□□ -1.45
HERC4-210ENST00000480158 QSOX2Q6ZRP7 698 aa6□□□□□ -1.45
HERC4-210ENST00000480158 ZNF771Q7L3S4 317 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 ANKRD37Q7Z713 158 aa6□□□□□ -1.45
HERC4-210ENST00000480158 IFNEQ86WN2 208 aa6□□□□□ -1.45
HERC4-210ENST00000480158 GALNT12Q8IXK2 581 aa6□□□□□ -1.45
HERC4-210ENST00000480158 MSRB3Q8IXL7 192 aa6□□□□□ -1.45
HERC4-210ENST00000480158 DEFB107AQ8IZN7 70 aa6□□□□□ -1.45
HERC4-210ENST00000480158 ST13P4Q8IZP2 240 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 PTPMT1Q8WUK0 201 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 OR5P2Q8WZ92 322 aa6□□□□□ -1.45
HERC4-210ENST00000480158 JADE3Q92613 823 aa6□□□□□ -1.45
HERC4-210ENST00000480158 LRRC58Q96CX6 371 aa6□□□□□ -1.45
HERC4-210ENST00000480158 CCDC115Q96NT0 180 aa6□□□□□ -1.45
HERC4-210ENST00000480158 SLC35A5Q9BS91 424 aa6□□□□□ -1.45
HERC4-210ENST00000480158 PAIP1Q9H074 479 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 SLC26A1Q9H2B4 701 aa6□□□□□ -1.45
HERC4-210ENST00000480158 IKZF5Q9H5V7 419 aa6□□□□□ -1.45
HERC4-210ENST00000480158 WDR54Q9H977 334 aa6□□□□□ -1.45
HERC4-210ENST00000480158 LIN28AQ9H9Z2 209 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 ADAP2Q9NPF8 381 aa6□□□□□ -1.45
HERC4-210ENST00000480158 SIRT3Q9NTG7 399 aaPredicted RBP6□□□□□ -1.45
HERC4-210ENST00000480158 ZCCHC3Q9NUD5 404 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 DDX18Q9NVP1 670 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 GMPR2Q9P2T1 348 aaKnown RBP6□□□□□ -1.45
HERC4-210ENST00000480158 BCAP29Q9UHQ4 241 aa6□□□□□ -1.45
HERC4-210ENST00000480158 BTNL2Q9UIR0 455 aa6□□□□□ -1.45
HERC4-210ENST00000480158 VPS4AQ9UN37 437 aa6□□□□□ -1.45
HERC4-210ENST00000480158 ERVK-19Q9WJR5 959 aa6□□□□□ -1.45
HERC4-210ENST00000480158 PADI2Q9Y2J8 665 aa6□□□□□ -1.45
HERC4-210ENST00000480158 AHCTF1Q8WYP5 2266 aa6□□□□□ -1.45
HERC4-210ENST00000480158 IGKV3D-11A0A0A0MRZ8 115 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 RNF103-CHMP3A0A140T963 221 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 TCRBV16S1A1N1A0A5B0 115 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 BBIP1A8MTZ0 92 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 UPK1AO00322 258 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 GYG2O15488 501 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 TBX19O60806 448 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 UNC5CO95185 931 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 ONECUT2O95948 504 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 ATP1B1P05026 303 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 KRT16P08779 473 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 PRKAR1AP10644 381 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 LIFP15018 202 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 DDX5P17844 614 aaKnown RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 TCN1P20061 433 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 PRDX6P30041 224 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 STT3AP46977 705 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 IL10RAQ13651 578 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 SERTAD2Q14140 314 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 NNATQ16517 81 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 PRICKLE4Q2TBC4 344 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.99□□□□□ -1.45
HERC4-210ENST00000480158 FAM91A1Q658Y4 838 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 NANOGP8Q6NSW7 305 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 DTX1Q86Y01 620 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 VWA5B2Q8N398 1253 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 FAM156AQ8NDB6 213 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 ZFP28Q8NHY6 868 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 THAP3Q8WTV1 239 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 KIAA1143Q96AT1 154 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 ELP4Q96EB1 424 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 FAM120BQ96EK7 910 aaKnown RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 C16orf58Q96GQ5 468 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 SENP5Q96HI0 755 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 CLPTM1LQ96KA5 538 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 NANOGQ9H9S0 305 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 CXorf21Q9HAI6 301 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 ACSS1Q9NUB1 689 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 TAS2R1Q9NYW7 299 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 ADA2Q9NZK5 511 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 MAT2BQ9NZL9 334 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 NXT1Q9UKK6 140 aaKnown RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 MMACHCQ9Y4U1 282 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 HS3ST3B1Q9Y662 390 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 CCDC88CQ9P219 2028 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 A0A096LPI6 279 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 DYTNA2CJ06 578 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 BLACEA4D250 179 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 FXYD1O00168 92 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 CLIC1O00299 241 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 KLK10O43240 276 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 CELA2AP08217 269 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 LIPCP11150 499 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 PTPN6P29350 595 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 SOX18P35713 384 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 FRKP42685 505 aaPredicted RBP5.99□□□□□ -1.45
HERC4-210ENST00000480158 CRATP43155 626 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 MNAT1P51948 309 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 SLC7A2P52569 658 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 MGAT2Q10469 447 aa5.99□□□□□ -1.45
HERC4-210ENST00000480158 LASP1Q14847 261 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms