RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PARP6Q2NL67 630 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 BBS12Q6ZW61 710 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 H2AFVQ71UI9 128 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 OTUD6BQ8N6M0 293 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 PIWIL2Q8TC59 973 aaKnown RBP10.58□□□□□ -0.72
USP11-208ENST00000480104 ACTL9Q8TC94 416 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 HAUS8Q9BT25 410 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 FANCFQ9NPI8 374 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 ESM1Q9NQ30 184 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 SYBUQ9NX95 663 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 CLEC4AQ9UMR7 237 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 NENFQ9UMX5 172 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 EMC9Q9Y3B6 208 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 ZNF175Q9Y473 711 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 TCAF1Q9Y4C2 921 aa10.58□□□□□ -0.72
USP11-208ENST00000480104 COL7A1Q02388 2944 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 SYCE3A1L190 88 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 E5RI56 91 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 PIN1P1O15428 100 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 AQP8O94778 261 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 ESR1P03372 595 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 CCND1P24385 295 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 ADRA1DP25100 572 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 HNRNPH1P31943 449 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 DEKP35659 375 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 CLCN7P51798 805 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 RPP38P78345 283 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 BCL2A1Q16548 175 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 FIGNL1Q6PIW4 674 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 PIWIL4Q7Z3Z4 852 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 KLHDC8AQ8IYD2 350 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 PRR22Q8IZ63 422 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 MUC15Q8N387 334 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 PPWD1Q96BP3 646 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 NXNL1Q96CM4 212 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 SNF8Q96H20 258 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 OR4K3Q96R72 315 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 RYDENQ9NUL5 291 aaKnown RBP10.57□□□□□ -0.72
USP11-208ENST00000480104 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP11-208ENST00000480104 DAPP1Q9UN19 280 aa10.57□□□□□ -0.72
USP11-208ENST00000480104 IQANK1A0A1B0GTG1 560 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 E7EQL1 145 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 DYRK3O43781 588 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 SHOX2O60902 331 aaPredicted RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 CDH16O75309 829 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 CBR3O75828 277 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 GAS8O95995 478 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 MPC1LP0DKB6 136 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 EPHA1P21709 976 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 PCMT1P22061 227 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 APEX1P27695 318 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 STT3AP46977 705 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 TMED10P49755 219 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 PLA2G16P53816 162 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 EIF3EP60228 445 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 STXBP1P61764 594 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 HERVK_113P63132 956 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 ERVK-8P63133 956 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 CDH17Q12864 832 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 RBBP5Q15291 538 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 TTLL9Q3SXZ7 439 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 CCDC181Q5TID7 509 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 SHQ1Q6PI26 577 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 Q6ZPA2 131 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 FBXL14Q8N1E6 418 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 WDSUB1Q8N9V3 476 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 NEIL2Q969S2 332 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 MS4A6EQ96DS6 147 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 TSNARE1Q96NA8 513 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 DGAT2Q96PD7 388 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 OSBPL11Q9BXB4 747 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 ERVK-6Q9BXR3 956 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 SNX15Q9NRS6 342 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 USP22Q9UPT9 525 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 EXO1Q9UQ84 846 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 ERVK-19Q9WJR5 959 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 CRYL1Q9Y2S2 319 aa10.56□□□□□ -0.72
USP11-208ENST00000480104 BZW2Q9Y6E2 419 aaKnown RBP10.56□□□□□ -0.72
USP11-208ENST00000480104 ABCD4O14678 606 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 SEC14L5O43304 696 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 FGF17O60258 216 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 ICOSLGO75144 302 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 TNFRSF21O75509 655 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 RHOXF2BP0C7M4 288 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 SRD5A2P31213 254 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 PTGDSP41222 190 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 GRIA1P42261 906 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 NEK2P51955 445 aa10.55□□□□□ -0.72
USP11-208ENST00000480104 DVL1P1P54792 670 aaPredicted RBP10.55□□□□□ -0.72
USP11-208ENST00000480104 CDH15P55291 814 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms