RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 C6orf52Q5T4I8 152 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ATAD3BQ5T9A4 648 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 FHL5Q5TD97 284 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 MFSD12Q6NUT3 480 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 CDC73Q6P1J9 531 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SLC23A3Q6PIS1 610 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 UGT2A3Q6UWM9 527 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 VTCN1Q7Z7D3 282 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 STK32CQ86UX6 486 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM105Q8N8V8 129 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 OR9A4Q8NGU2 314 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SPPL2AQ8TCT8 520 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 MAGEE2Q8TD90 523 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 N4BP2L2Q92802 583 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 PMM1Q92871 262 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 NAT6Q93015 286 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 FKBP10Q96AY3 582 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ANKRD9Q96BM1 317 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 GIMAP5Q96F15 307 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 TRNT1Q96Q11 434 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 PELOQ9BRX2 385 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ADI1Q9BV57 179 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF768Q9H5H4 540 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 TRIM45Q9H8W5 580 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 REEP1Q9H902 201 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 EXD2Q9NVH0 621 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 GIN1Q9NXP7 522 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 TRPC4Q9UBN4 977 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SCOCQ9UIL1 159 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 RAB23Q9ULC3 237 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 SLC6A14Q9UN76 642 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 CDC14AQ9UNH5 594 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 ABCG2Q9UNQ0 655 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 C19orf53Q9UNZ5 99 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 PCDHGB3Q9Y5G1 929 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-204ENST00000480057 CACNA1EQ15878 2313 aa10.34□□□□□ -0.75
VTI1A-204ENST00000480057 TECTAO75443 2155 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 A0A0A6YYC8 382 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 A0A1W2PS29 197 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 EME2A4GXA9 379 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 A8MVJ9 347 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 H3BMH7 237 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 I3L1I5 382 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CLDN4O14493 209 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CASC3O15234 703 aaKnown RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 FGF17O60258 216 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 PCDHGA12O60330 932 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CTNSO60931 367 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 DNAJB6O75190 326 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 COQ9O75208 318 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 DNAJB5O75953 348 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 AK1P00568 194 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ALBP02768 609 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 GUSBP08236 651 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 SYPP08247 313 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 THRBP10828 461 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 NELFEP18615 380 aaKnown RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CD247P20963 164 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 MYF6P23409 242 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CSF2RBP32927 897 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CAPGP40121 348 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 GCGRP47871 477 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 KCNJ5P48544 419 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 RPS6KA3P51812 740 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CASP9P55211 416 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 HSD17B7P56937 341 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CFHR1Q03591 330 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 MAP4K2Q12851 820 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 PRICKLE4Q2TBC4 344 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 NKAIN2Q5VXU1 208 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 HEPHL1Q6MZM0 1159 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 TMEM71Q6P5X7 295 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 SZRD1Q7Z422 152 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 GALNT10Q86SR1 603 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 APLFQ8IW19 511 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 DHRSXQ8N5I4 330 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ZBTB44Q8NCP5 570 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 OR7G2Q8NG99 324 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 OR5T3Q8NGG3 340 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 XAGE5Q8WWM1 108 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 PROX1Q92786 737 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 RAB8BQ92930 207 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CCDC74AQ96AQ1 378 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CTHRC1Q96CG8 243 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF578Q96N58 590 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 OR7D2Q96RA2 312 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF300Q96RE9 604 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 STACQ99469 402 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 TREX2Q9BQ50 279 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF696Q9H7X3 374 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 STARD5Q9NSY2 213 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 NDUFAF4Q9P032 175 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 PDP2Q9P2J9 529 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 C3orf18Q9UK00 162 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 CLCA2Q9UQC9 943 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 MMACHCQ9Y4U1 282 aa10.33□□□□□ -0.76
VTI1A-204ENST00000480057 ENPP4Q9Y6X5 453 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms