RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MLF1P58340 268 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 RNF4P78317 190 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 ZNF385BQ569K4 471 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 LINC00696Q6ZRV3 163 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 VWA5B2Q8N398 1253 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 OR5L2Q8NGL0 311 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 DOK4Q8TEW6 326 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 HAS2Q92819 552 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 ERP27Q96DN0 273 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 MFRPQ9BY79 579 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 CDCP1Q9H5V8 836 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 SH3BP4Q9P0V3 963 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 TMEM200CA6NKL6 621 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 OR6C76A6NM76 312 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ANKRD28O15084 1053 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 DIAPH2O60879 1101 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 SLITRK5O94991 958 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ALDOCP09972 364 aaKnown RBP24.86■■□□□ 1.57
CCM2-211ENST00000478582 NTSP30990 170 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 MDH1P40925 334 aaKnown RBP24.86■■□□□ 1.57
CCM2-211ENST00000478582 GUCY1A3Q02108 690 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 MPEG1Q2M385 716 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ZNF628Q5EBL2 1059 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 SLC6A19Q695T7 634 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 FCRLBQ6BAA4 426 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ANKRD26P1Q6NSI1 321 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 FAM111BQ6SJ93 734 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 RNF111Q6ZNA4 994 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ZADH2Q8N4Q0 377 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 NATD1Q8N6N6 113 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 ZNF615Q8N8J6 731 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 NUBPLQ8TB37 319 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 STON2Q8WXE9 905 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 PNPLA2Q96AD5 504 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 COQ8BQ96D53 544 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 OR52B2Q96RD2 323 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 PRPF18Q99633 342 aaKnown RBP24.86■■□□□ 1.57
CCM2-211ENST00000478582 BRINP2Q9C0B6 783 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 GLIPR2Q9H4G4 154 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 AIG1Q9NVV5 245 aa24.86■■□□□ 1.57
CCM2-211ENST00000478582 PDPK1O15530 556 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 MAN1A2O60476 641 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 SSTR4P31391 388 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 NCBP2P52298 156 aaKnown RBP eCLIP24.85■■□□□ 1.57
CCM2-211ENST00000478582 LTB4RQ15722 352 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 LSM12Q3MHD2 195 aaKnown RBP24.85■■□□□ 1.57
CCM2-211ENST00000478582 NXNQ6DKJ4 435 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 CAMKMTQ7Z624 323 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 C9orf40Q8IXQ3 194 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 KRTCAP2Q8N6L1 136 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 ADCY4Q8NFM4 1077 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 OR9A2Q8NGT5 310 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 AMDHD1Q96NU7 426 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 OR10A5Q9H207 317 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 SLAMF7Q9NQ25 335 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 ACSS1Q9NUB1 689 aaPredicted RBP24.85■■□□□ 1.57
CCM2-211ENST00000478582 ABI3Q9P2A4 366 aa24.85■■□□□ 1.57
CCM2-211ENST00000478582 IFI6P09912 130 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 CD97P48960 835 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 IDH3AP50213 366 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 AQP5P55064 265 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 CPTPQ5TA50 214 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 ACAD11Q709F0 780 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 BEST3Q8N1M1 668 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 OR7A2PQ8NGA2 310 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 ZBED6CLQ96FA7 236 aaPredicted RBP24.84■■□□□ 1.57
CCM2-211ENST00000478582 CCDC28BQ9BUN5 200 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 DPY30Q9C005 99 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 RYDENQ9NUL5 291 aaKnown RBP24.84■■□□□ 1.57
CCM2-211ENST00000478582 ATAD3AQ9NVI7 634 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 MYOTQ9UBF9 498 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 GPR45Q9Y5Y3 372 aa24.84■■□□□ 1.57
CCM2-211ENST00000478582 MYO18BQ8IUG5 2567 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 PLOD2O00469 737 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 PLOD3O60568 738 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 BCAS2O75934 225 aaPredicted RBP24.83■■□□□ 1.57
CCM2-211ENST00000478582 WDPCPO95876 746 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 PTGER1P34995 402 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 MLC1Q15049 377 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 TRMT12Q53H54 448 aaKnown RBP24.83■■□□□ 1.57
CCM2-211ENST00000478582 SLC29A4Q7RTT9 530 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 Q8NA96 180 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 ZFP28Q8NHY6 868 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 CPT1CQ8TCG5 803 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 CIDECQ96AQ7 238 aaPredicted RBP24.83■■□□□ 1.57
CCM2-211ENST00000478582 SIKE1Q9BRV8 207 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 TCF7L2Q9NQB0 619 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 YARS2Q9Y2Z4 477 aaKnown RBP24.83■■□□□ 1.57
CCM2-211ENST00000478582 NBASA2RRP1 2371 aa24.83■■□□□ 1.57
CCM2-211ENST00000478582 CPAMD8Q8IZJ3 1885 aa24.83■■□□□ 1.56
CCM2-211ENST00000478582 A0A087WV62 115 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 DYTNA2CJ06 578 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 FCHO1O14526 889 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 CBX7O95931 251 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 LAMP1P11279 417 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 IDO1P14902 403 aa24.82■■□□□ 1.56
CCM2-211ENST00000478582 TRHRP34981 398 aaPredicted RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 MRPS35P82673 323 aaKnown RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 EBPQ15125 230 aaKnown RBP24.82■■□□□ 1.56
CCM2-211ENST00000478582 GSTA3Q16772 222 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms