RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 HSPB3Q12988 150 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 NNATQ16517 81 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 PRSS53Q2L4Q9 553 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 HSP90B2PQ58FF3 399 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 IL23RQ5VWK5 629 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SPINK14Q6IE38 97 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 Q6ZS92 163 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 FAM9CQ8IZT9 166 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 LGI4Q8N135 537 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SIMC1Q8NDZ2 872 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 ASB15Q8WXK1 588 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 HAS2Q92819 552 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 CIDECQ96AQ7 238 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 PPCDCQ96CD2 204 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 ZNF681Q96N22 645 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 HES7Q9BYE0 225 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 WWTR1Q9GZV5 400 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 RNF32Q9H0A6 362 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 OR10A5Q9H207 317 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 ANKRA2Q9H9E1 313 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SLCO1B3Q9NPD5 702 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 MAT2BQ9NZL9 334 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 NOP53Q9NZM5 478 aaKnown RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SH3BP4Q9P0V3 963 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 LRFN1Q9P244 771 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 MYOTQ9UBF9 498 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 BCAP29Q9UHQ4 241 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 HAO1Q9UJM8 370 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 EXO1Q9UQ84 846 aaKnown RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 ERVK-11Q9UQG0 969 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 EIF3LQ9Y262 564 aaKnown RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 NINQ8N4C6 2090 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 TRAV17A0A0B4J275 112 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 TMEM200CA6NKL6 621 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 TRPC5OSA6NMA1 111 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 A8MVJ9 347 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 KLF11O14901 512 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 SCAMP2O15127 329 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 HDAC3O15379 428 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 SLC25A12O75746 678 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 OR6B1O95007 311 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CLPSP04118 112 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 G6PDP11413 515 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 EPHA3P29320 983 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 GALNSP34059 522 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 MPIP34949 423 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CD96P40200 585 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 SOX3P41225 446 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CYB561P49447 251 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 MAD2L1Q13257 205 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 EBPQ15125 230 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 PRICKLE4Q2TBC4 344 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 TRMT12Q53H54 448 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 ZNF385BQ569K4 471 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 ZNF766Q5HY98 468 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 HLA-DQA1Q5Y7H0 255 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 NXNQ6DKJ4 435 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 TMEM107Q6UX40 140 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 IL20RBQ6UXL0 311 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 FAM47EQ6ZV65 393 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 SZRD1Q7Z422 152 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 WDR75Q8IWA0 830 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 SAMD14Q8IZD0 417 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CYP4Z2PQ8N1L4 340 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CISD2Q8N5K1 135 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 KRTCAP2Q8N6L1 136 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 OR7A2PQ8NGA2 310 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 OR52R1Q8NGF1 315 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 OR5L2Q8NGL0 311 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 C16orf52Q8NHV5 167 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 CPT1CQ8TCG5 803 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 NUDT8Q8WV74 236 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 MAGED4Q96JG8 741 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 RASL10BQ96S79 203 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 REEP4Q9H6H4 257 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 MEAF6Q9HAF1 191 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 HPF1Q9NWY4 346 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 DTX4Q9Y2E6 619 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 WBP11Q9Y2W2 641 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 YARS2Q9Y2Z4 477 aaKnown RBP6.39□□□□□ -1.39
BRCA1-215ENST00000478531 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 HIVEP3Q5T1R4 2406 aa6.39□□□□□ -1.39
BRCA1-215ENST00000478531 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 OR6C76A6NM76 312 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 SDHDO14521 159 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 PRAMEF2O60811 474 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 DIAPH2O60879 1101 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 NME6O75414 186 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-215ENST00000478531 NEURL1O76050 574 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 CBX7O95931 251 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 PRPS2P11908 318 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 GPC1P35052 558 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 MC3RP41968 323 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 NR0B1P51843 470 aaKnown RBP6.38□□□□□ -1.39
BRCA1-215ENST00000478531 DIO3P55073 304 aa6.38□□□□□ -1.39
BRCA1-215ENST00000478531 NME5P56597 212 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms