RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 FHL5Q5TD97 284 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 FAM71E1Q6IPT2 247 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 OPN5Q6U736 354 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 CCDC116Q8IYX3 515 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 PSD4Q8NDX1 1056 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 SIMC1Q8NDZ2 872 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 METTL2AQ96IZ6 378 aaKnown RBP14.41□□□□□ -0.1
HMGA1-206ENST00000478214 TSPAN10Q9H1Z9 355 aaPredicted RBP14.41□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF395Q9H8N7 513 aaPredicted RBP14.41□□□□□ -0.1
HMGA1-206ENST00000478214 MYNNQ9NPC7 610 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 SLC35C2Q9NQQ7 365 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF639Q9UID6 485 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 C2orf92A0A1B0GVN3 265 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 LSM1O15116 133 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 BIRC5O15392 142 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 ITM2AO43736 263 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 LYPLA1O75608 230 aaPredicted RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 UNC5CO95185 931 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 ZWINTO95229 277 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 SERPINE1P05121 402 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 PCSK2P16519 638 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 RFC3P40938 356 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 MRPS35P82673 323 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 ALDH6A1Q02252 535 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 DUSP8Q13202 625 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 EXOSC7Q15024 291 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 GALNTL6Q49A17 601 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 TRMT12Q53H54 448 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 LYPD8Q6UX82 237 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 GFRALQ6UXV0 394 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 RTL4Q6ZR62 310 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 TICAM1Q8IUC6 712 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF441Q8N8Z8 693 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 OR7G1Q8NGA0 311 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 SLC22A8Q8TCC7 542 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 CTHRC1Q96CG8 243 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 EGLN2Q96KS0 407 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 FCRL1Q96LA6 429 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 DEPPQ9NTK1 212 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 GIMAP4Q9NUV9 329 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 EHD3Q9NZN3 535 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 SEC14L3Q9UDX4 400 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 GIMAP2Q9UG22 337 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 BCAP29Q9UHQ4 241 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 EXO1Q9UQ84 846 aaKnown RBP14.4□□□□□ -0.1
HMGA1-206ENST00000478214 ENTPD4Q9Y227 616 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 OSGIN2Q9Y236 505 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 HIVEP3Q5T1R4 2406 aa14.4□□□□□ -0.1
HMGA1-206ENST00000478214 A0A0G2JMM0 328 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 A0A1W2PPB8 328 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 A0A1W2PRS3 328 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 KIR3DP1A8MWS1 328 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 NPIPA5E9PKD4 350 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 G3V3Y1 287 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 KLRC4-KLRK1H3BQV0 150 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 AGFG2O95081 481 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 HSPA4LO95757 839 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 CBX7O95931 251 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 CCL3P10147 92 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF24P17028 368 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 NR0B1P51843 470 aaKnown RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 RPL38P63173 70 aaKnown RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 CASP8Q14790 479 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF791Q3KP31 576 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 RFTN2Q52LD8 501 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF628Q5EBL2 1059 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 HLA-DQA1Q5Y7H0 255 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 TMEM64Q6YI46 380 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 SIAH3Q8IW03 269 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 SAMD14Q8IZD0 417 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 SLC15A4Q8N697 577 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ANKRD42Q8N9B4 389 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 OR9A2Q8NGT5 310 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 C16orf52Q8NHV5 167 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ADIPOR1Q96A54 375 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 SGCZQ96LD1 299 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 BBS4Q96RK4 519 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 MIEF1Q9NQG6 463 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 NPIPA1Q9UND3 350 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 DTX4Q9Y2E6 619 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 WBP11Q9Y2W2 641 aaKnown RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 ASH1LQ9NR48 2969 aaKnown RBP14.39□□□□□ -0.11
HMGA1-206ENST00000478214 HECTD1Q9ULT8 2610 aa14.39□□□□□ -0.11
HMGA1-206ENST00000478214 TMEM120BA0PK00 339 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 PINLYPA6NC86 204 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 SKAP2O75563 359 aaPredicted RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 FBXO45P0C2W1 286 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 SDC1P18827 310 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 BGNP21810 368 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 GPX3P22352 226 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ABCE1P61221 599 aaKnown RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 CEBPEQ15744 281 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 XKR7Q5GH72 579 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 IKBIPQ70UQ0 350 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 TAGAPQ8N103 731 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ZFP62Q8NB50 900 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms