RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ADARB1P78563 741 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EFNB1P98172 346 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CDK16Q00536 496 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 NHLH1Q02575 133 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC3A1Q07837 685 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ITGADQ13349 1161 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 AQP6Q13520 282 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PTPRCAPQ14761 206 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CA9Q16790 459 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PHKG1Q16816 387 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 EXOC3L2Q2M3D2 409 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GALNTL6Q49A17 601 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 AKIRIN2Q53H80 203 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC25A53Q5H9E4 307 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 Q5PR19 223 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 LDLRAP1Q5SW96 308 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PDSS1Q5T2R2 415 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 C20orf194Q5TEA3 1177 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SEL1L2Q5TEA6 688 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 RAET1LQ5VY80 246 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 KIAA0895LQ68EN5 471 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 VSTM1Q6UX27 236 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CLEC18BQ6UXF7 455 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 LRRC74BQ6ZQY2 392 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 USP43Q70EL4 1123 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GSTA5Q7RTV2 222 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SMIM15Q7Z3B0 74 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GPR141Q7Z602 305 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CCDC28AQ8IWP9 274 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MICU2Q8IYU8 434 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ADGRF4Q8IZF3 695 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GPC2Q8N158 579 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 GTPBP8Q8N3Z3 284 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM109AQ8N4B1 249 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 BCORP1Q8N888 145 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 AMER3Q8N944 861 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CCDC71LQ8N9Z2 235 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CYB561A3Q8NBI2 242 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ADPRHL1Q8NDY3 354 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 DNAAF1Q8NEP3 725 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 OR10S1Q8NGN2 331 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 OR6X1Q8NH79 312 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MRGPRDQ8TDS7 321 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SMPDL3BQ92485 455 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLCO2A1Q92959 643 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 YIPF5Q969M3 257 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM136AQ96C01 138 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SGTBQ96EQ0 304 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PACRGQ96M98 296 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 WDFY2Q96P53 400 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 KRT12Q99456 494 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PAFAH2Q99487 392 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC30A2Q9BRI3 323 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MESP1Q9BRJ9 268 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SEC22CQ9BRL7 303 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.31□□□□□ -1.888e-6■■□□□ 12.9
FNDC3B-209ENST00000478016 C1QTNF7Q9BXJ2 289 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 AMBRA1Q9C0C7 1298 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ZYG11BQ9C0D3 744 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MS4A7Q9GZW8 240 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MAGT1Q9H0U3 335 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PIGUQ9H490 435 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM83DQ9H4H8 585 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ASB7Q9H672 318 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 VIPAS39Q9H9C1 493 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 ZDHHC4Q9NPG8 344 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MKKSQ9NPJ1 570 aaPredicted RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 XPNPEP1Q9NQW7 623 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 PDGFCQ9NRA1 345 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MRPL22Q9NWU5 206 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 MTMR10Q9NXD2 777 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 TAS2R1Q9NYW7 299 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 STMN3Q9NZ72 180 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CNOT2Q9NZN8 540 aaKnown RBP3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 OR6C3Q9NZP0 311 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CD274Q9NZQ7 290 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC17A7Q9P2U7 560 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SMPXQ9UHP9 88 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 BTNL2Q9UIR0 455 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 NENFQ9UMX5 172 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 CNTN6Q9UQ52 1028 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC22A13Q9Y226 551 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 STARD10Q9Y365 291 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 SLCO1B1Q9Y6L6 691 aa3.31□□□□□ -1.88
FNDC3B-209ENST00000478016 USP32Q8NFA0 1604 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 MYOM2P54296 1465 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 PXDNQ92626 1479 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 CDK12Q9NYV4 1490 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 PRAG1Q86YV5 1406 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 A0A1B0GVM2 712 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 A0A1W2PPC1 479 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 A0A1W2PPQ1 181 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC5A10A0PJK1 596 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 A6NIZ1 184 aa3.3□□□□□ -1.88
FNDC3B-209ENST00000478016 FAM90A8PA6NJQ4 464 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms