RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 A0A1W2PRB8 838 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 FCHO1O14526 889 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 NDUFAB1O14561 156 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 CCDC22O60826 627 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 C6orf47O95873 294 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 IL6P05231 212 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 PGRP06401 933 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 CT62P0C5K7 136 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 GPC1P35052 558 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 MC3RP41968 323 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 ZFP36L2P47974 494 aaKnown RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 MANFP55145 182 aaKnown RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 MRPS35P82673 323 aaKnown RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 SRSF1Q07955 248 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEC13-215ENST00000477547 ZNF267Q14586 743 aaPredicted RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 ZNF628Q5EBL2 1059 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 PLAG1Q6DJT9 500 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 TMEM107Q6UX40 140 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 GK5Q6ZS86 529 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 ANKRD46Q86W74 232 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 CLECL1Q8IZS7 167 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 CPSF7Q8N684 471 aaKnown RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 TMEM102Q8N9M5 508 aaPredicted RBP14.28□□□□□ -0.12
SEC13-215ENST00000477547 CLEC1AQ8NC01 280 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 TTC9Q92623 222 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 NCLNQ969V3 563 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 VMP1Q96GC9 406 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 IMMP1LQ96LU5 166 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 NEUROD4Q9HD90 331 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 ARMCX1Q9P291 453 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 COPS7AQ9UBW8 275 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 CAPN7Q9Y6W3 813 aa14.28□□□□□ -0.12
SEC13-215ENST00000477547 HRKO00198 91 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 RNASET2O00584 256 aaKnown RBP14.27□□□□□ -0.12
SEC13-215ENST00000477547 CFLARO15519 480 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 SLITRK5O94991 958 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 DDAH2O95865 285 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 ABCB1P08183 1280 aaPredicted RBP14.27□□□□□ -0.12
SEC13-215ENST00000477547 CELA2AP08217 269 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 SOAT1P35610 550 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 CDK9P50750 372 aaKnown RBP14.27□□□□□ -0.12
SEC13-215ENST00000477547 WNT3P56703 355 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 ANXA8L1Q5VT79 327 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 FAM111BQ6SJ93 734 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 DNAJC14Q6Y2X3 702 aaPredicted RBP14.27□□□□□ -0.12
SEC13-215ENST00000477547 SZRD1Q7Z422 152 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 CCDC197Q8NCU1 140 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 NFAM1Q8NET5 270 aaPredicted RBP14.27□□□□□ -0.12
SEC13-215ENST00000477547 BCAS4Q8TDM0 211 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 KAT2AQ92830 837 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 SPDL1Q96EA4 605 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 OR52E6Q96RD3 313 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 TMEM45AQ9NWC5 275 aa14.27□□□□□ -0.12
SEC13-215ENST00000477547 TRBV11-1A0A0K0K1C0 115 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 CCDC154A6NI56 674 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 CAPN3P20807 821 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 SSTR4P31391 388 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 PHC1P78364 1004 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 KLF10Q13118 480 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 AIMP2Q13155 320 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 EXOSC7Q15024 291 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 MLC1Q15049 377 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 RNF111Q6ZNA4 994 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 MSANTD1Q6ZTZ1 278 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 MTDHQ86UE4 582 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 FUNDC1Q8IVP5 155 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 KBTBD2Q8IY47 623 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 AMER2Q8N7J2 671 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 ZNF321PQ8N8H1 164 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 APCDD1LQ8NCL9 501 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 VPS37AQ8NEZ2 397 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 OR7G2Q8NG99 324 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 OR4A15Q8NGL6 344 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 OR1N1Q8NGS0 311 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 ZNF721Q8TF20 911 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 OR5P2Q8WZ92 322 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 VPS33AQ96AX1 596 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 NUDT9Q9BW91 350 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 MMP25Q9NPA2 562 aa14.26□□□□□ -0.13
SEC13-215ENST00000477547 DDX18Q9NVP1 670 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 PPIEQ9UNP9 301 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 TNRC6AQ8NDV7 1962 aaKnown RBP14.26□□□□□ -0.13
SEC13-215ENST00000477547 PRSS51A0A1B0GVH4 220 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SLC22A2O15244 555 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 PRAMEF2O60811 474 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SCN2BO60939 215 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 DCTN3O75935 186 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 IGKV3-11P04433 115 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SERPINA7P05543 415 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ICAM2P13598 275 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ITGA3P26006 1051 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 CLCN2P51788 898 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 AP2B1P63010 937 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 HBA1P69905 142 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 Q0VFX4 171 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 MGAT2Q10469 447 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 MAP4K2Q12851 820 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms