RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DOCK6Q96HP0 2047 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 ANAPC1Q9H1A4 1944 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 HTTP42858 3142 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 OBSL1O75147 1896 aa3.52□□□□□ -1.85
UBR3-209ENST00000477461 AGRNO00468 2067 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 C2orf16Q68DN1 1984 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 TRAV19A0A0A6YYK7 116 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 FAM92AA1XBS5 289 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 YJEFN3A6XGL0 299 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 BTNL10A8MVZ5 291 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 E7ENQ6 273 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 KIF2AO00139 706 aaPredicted RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 GAPDHSO14556 408 aaPredicted RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 PRPSAP2O60256 369 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 DUS4LO95620 317 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 TRUB2O95900 331 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 BCL10O95999 233 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 APOEP02649 317 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 ACP2P11117 423 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SLC2A3P11169 496 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 MBL2P11226 248 aaPredicted RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 HMGA1P17096 107 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 GABRA5P31644 462 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 ATP5C1P36542 298 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 CETN2P41208 172 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 MATKP42679 507 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 MTHFRP42898 656 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SLC1A1P43005 524 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 CCR3P51677 355 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 CDH13P55290 713 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 PPARDQ03181 441 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 LGALS3BPQ08380 585 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 NME3Q13232 169 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SNTB1Q13884 538 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 MESDQ14696 234 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 TEAD2Q15562 447 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 HADHQ16836 314 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 SNAI3Q3KNW1 292 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 C9orf152Q5JTZ5 239 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 C11orf63Q6NUN7 778 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 FAAP20Q6NZ36 180 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SCYL2Q6P3W7 929 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 TMEM184AQ6ZMB5 413 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 Q7L0L9 218 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 ARCQ7LC44 396 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SLC16A9Q7RTY1 509 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 PEX26Q7Z412 305 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 NUDT13Q86X67 352 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 UBL4BQ8N7F7 174 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 ZNF614Q8N883 585 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 LSMEM1Q8N8F7 131 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 POGLUT1Q8NBL1 392 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 VN1R2Q8NFZ6 395 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 JOSD2Q8TAC2 188 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 OLIG1Q8TAK6 271 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 KIAA1524Q8TCG1 905 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 DQX1Q8TE96 717 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 FAM172AQ8WUF8 416 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 UBE2Q2Q8WVN8 375 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 ING5Q8WYH8 240 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 NDRG1Q92597 394 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 PTERQ96BW5 349 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 PIWIL1Q96J94 861 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 CDX2Q99626 313 aaPredicted RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 OLFM1Q99784 485 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 RBM4BQ9BQ04 359 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 TRIM51Q9BSJ1 452 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 CNPY3Q9BT09 278 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 CCDC106Q9BWC9 280 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 KLHL4Q9C0H6 718 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 NMUR1Q9HB89 426 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 OLAHQ9NV23 265 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 DDIT4Q9NX09 232 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SPHK1Q9NYA1 384 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 CLIC5Q9NZA1 410 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 IL37Q9NZH6 218 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 TRIM10Q9UDY6 481 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SLC12A6Q9UHW9 1150 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 LSM7Q9UK45 103 aaKnown RBP3.51□□□□□ -1.85
UBR3-209ENST00000477461 TFR2Q9UP52 801 aa3.51□□□□□ -1.85
UBR3-209ENST00000477461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.51□□□□□ -1.85
UBR3-209ENST00000477461 HELZP42694 1942 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 CLUHO75153 1309 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 A0A1W2PPQ1 181 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 HYKKA2RU49 373 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZNF840PA6NDX5 716 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 USP27XA6NNY8 438 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 MIF4GDA9UHW6 222 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 PALMO75781 387 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZFAND5O76080 213 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 PROSCO94903 275 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 MOCS2O96007 188 aaPredicted RBP3.5□□□□□ -1.85
UBR3-209ENST00000477461 RAF1P04049 648 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 KRT7P08729 469 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 FRMD6-AS1P0C7T7 363 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 ZDHHC11BP0C7U3 371 aa3.5□□□□□ -1.85
UBR3-209ENST00000477461 GATA1P15976 413 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms