RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ACKR3P25106 362 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CTGFP29279 349 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CASP14P31944 242 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 DCTDP32321 178 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PTGER4P35408 488 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CD96P40200 585 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 OR3A3P47888 321 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CCT3P49368 545 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CSNK1EP49674 416 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FHITP49789 147 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ARHGDIAP52565 204 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SEC61GP60059 68 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MYL6P60660 151 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 HERV-K104P63124 156 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 HERVK_113P63132 956 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ERVK-8P63133 956 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TNNC1P63316 161 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FKBP1BP68106 108 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SRSF3P84103 164 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PSG6Q00889 435 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 DR1Q01658 176 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 GABPAQ06546 454 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FOXM1Q08050 763 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 BST2Q10589 180 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PLA2G7Q13093 441 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SLAQ13239 276 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RCAN2Q14206 197 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 GRM7Q14831 915 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 P2RY14Q15391 338 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ELAVL1Q15717 326 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RSPO4Q2I0M5 234 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ODF4Q2M2E3 257 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CCDC14Q49A88 953 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ARMCX4Q5H9R4 360 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FRG2Q64ET8 278 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NAIF1Q69YI7 327 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RHBDD2Q6NTF9 364 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TTC27Q6P3X3 843 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RNASEKQ6P5S7 137 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 DOK6Q6PKX4 331 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 BHLHA15Q7RTS1 189 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 GOLGA7Q7Z5G4 137 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SNX20Q7Z614 316 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SCD5Q86SK9 330 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TRIM74Q86UV6 250 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TRIM73Q86UV7 250 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CCDC25Q86WR0 208 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 COMMD2Q86X83 199 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NUDCD3Q8IVD9 361 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CROCCP3Q8IVE0 287 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CDKL3Q8IVW4 592 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SFTPA2Q8IWL1 248 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 LINC01465Q8N7H1 131 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM99Q8N816 258 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CNBD1Q8NA66 436 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 THAP8Q8NA92 274 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NOA1Q8NC60 698 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SLC44A5Q8NCS7 719 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 DDHD1Q8NEL9 900 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 OR5T3Q8NGG3 340 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MYCBPAPQ8TBZ2 947 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CCDC107Q8WV48 283 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TCP11Q8WWU5 503 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PIGCQ92535 297 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 GLYATL1Q969I3 302 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MCHR2Q969V1 340 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TP53INP1Q96A56 240 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RFT1Q96AA3 541 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM45BQ96B21 275 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PYCR2Q96C36 320 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 COQ8BQ96D53 544 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 LGALS12Q96DT0 336 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SENP5Q96HI0 755 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ZFYVE19Q96K21 471 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PBKQ96KB5 322 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CASD1Q96PB1 797 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 GFI1Q99684 422 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TSG101Q99816 390 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NDUFAF3Q9BU61 184 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 C20orf24Q9BUV8 137 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 TRMT61BQ9BVS5 477 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 BBS2Q9BXC9 721 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ERVK-6Q9BXR3 956 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FRMD8Q9BZ67 464 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FRMD8P1Q9BZ68 369 aaPredicted RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SLC39A8Q9C0K1 460 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NDEL1Q9GZM8 345 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MTIF3Q9H2K0 278 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 RHBGQ9H310 441 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 FBXO44Q9H4M3 255 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 SLITRK6Q9H5Y7 841 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 PPP1R3EQ9H7J1 279 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 AGO3Q9H9G7 860 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 CALHM2Q9HA72 323 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 ELOVL3Q9HB03 270 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 KCNK12Q9HB15 430 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 LPAR2Q9HBW0 351 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MCCC2Q9HCC0 563 aa2.68□□□□□ -1.98
HMGN4-202ENST00000477243 MRPS30Q9NP92 439 aaKnown RBP2.68□□□□□ -1.98
HMGN4-202ENST00000477243 NOX4Q9NPH5 578 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms