RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 NDUFAF5Q5TEU4 345 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 PAOXQ6QHF9 649 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 IKBIPQ70UQ0 350 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 FAM9CQ8IZT9 166 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 TMEM52Q8NDY8 209 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 OR9I1Q8NGQ6 314 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 NACC2Q96BF6 587 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 TEX37Q96LM6 180 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 FAIM2Q9BWQ8 316 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 CLK4Q9HAZ1 481 aaKnown RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 SDR39U1Q9NRG7 319 aaPredicted RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 ARMCX1Q9P291 453 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 IFT80Q9P2H3 777 aaPredicted RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 CTSFQ9UBX1 484 aa10.79□□□□□ -0.68
LSM2-212ENST00000477182 EXO1Q9UQ84 846 aaKnown RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 PTRH2Q9Y3E5 179 aaKnown RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 NUP214P35658 2090 aaPredicted RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 NCOA6Q14686 2063 aaPredicted RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 MAP1AP78559 2803 aaPredicted RBP10.79□□□□□ -0.68
LSM2-212ENST00000477182 WASHC1A8K0Z3 465 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 C19orf84I3L1E1 186 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 CYR61O00622 381 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 SCAMP2O15127 329 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 PGRMC2O15173 223 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 B4GALT2O60909 372 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 SLC22A3O75751 556 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 DCTN3O75935 186 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ONECUT2O95948 504 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 PIM1P11309 404 aaPredicted RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 ESRRAP11474 423 aaPredicted RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 PRPS1L1P21108 318 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 IL12AP29459 219 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 TLX1P31314 330 aaPredicted RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 HPCAL1P37235 193 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 KIR3DL1P43629 444 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 MRPL19P49406 292 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 HNRNPFP52597 415 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 Q0VFX4 171 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 KLF10Q13118 480 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 HEPACAMQ14CZ8 416 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 AGKQ53H12 422 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 MLIPQ5VWP3 458 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ANKRD26P1Q6NSI1 321 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ZC3H7AQ8IWR0 971 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 RIMKLAQ8IXN7 391 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 PRSS58Q8IYP2 241 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 CPSF7Q8N684 471 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 OR2Y1Q8NGV0 311 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 TBC1D20Q96BZ9 403 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ZBTB18Q99592 522 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 MYLK2Q9H1R3 596 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 REEP4Q9H6H4 257 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 RPF2Q9H7B2 306 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 WDR41Q9HAD4 459 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 MKKSQ9NPJ1 570 aaPredicted RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 MIEF1Q9NQG6 463 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ZIM2Q9NZV7 527 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 WBP11Q9Y2W2 641 aaKnown RBP10.78□□□□□ -0.68
LSM2-212ENST00000477182 PCDHA9Q9Y5H5 950 aa10.78□□□□□ -0.68
LSM2-212ENST00000477182 ACANP16112 2415 aa10.77□□□□□ -0.68
LSM2-212ENST00000477182 C1orf226A1L170 272 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 OR2W5A6NFC9 320 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PRMT3O60678 531 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 CDC123O75794 336 aaPredicted RBP10.77□□□□□ -0.69
LSM2-212ENST00000477182 BMP10O95393 424 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 FHP07954 510 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 COX7A2P14406 83 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 FOSL1P15407 271 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PCSK2P16519 638 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 KLK2P20151 261 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 DDCP20711 480 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 JAK1P23458 1154 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PIK3R1P27986 724 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 CLNS1AP54105 237 aaKnown RBP10.77□□□□□ -0.69
LSM2-212ENST00000477182 FOXL2P58012 376 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 C21orf58P58505 322 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 IRX1P78414 480 aaPredicted RBP10.77□□□□□ -0.69
LSM2-212ENST00000477182 OCA2Q04671 838 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PRSS53Q2L4Q9 553 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PGS1Q32NB8 556 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 ZNF385BQ569K4 471 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 OVCH1Q7RTY7 1134 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 PPP1R32Q7Z5V6 425 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 OR7A2PQ8NGA2 310 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 STT3BQ8TCJ2 826 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 ADAMTS18Q8TE60 1221 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 EXOSC8Q96B26 276 aaKnown RBP10.77□□□□□ -0.69
LSM2-212ENST00000477182 PPCDCQ96CD2 204 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 LRRC37BQ96QE4 947 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 OR1F2PQ96R84 312 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 CCDC106Q9BWC9 280 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 ENKD1Q9H0I2 346 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 LANCL2Q9NS86 450 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 CCDC167Q9P0B6 97 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 SH3BP4Q9P0V3 963 aa10.77□□□□□ -0.69
LSM2-212ENST00000477182 ZNF282Q9UDV7 671 aaPredicted RBP10.77□□□□□ -0.69
LSM2-212ENST00000477182 ATP6V1HQ9UI12 483 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms