RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 DDX5P17844 614 aaKnown RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 LBPP18428 481 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 PTGER1P34995 402 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 RPL3P39023 403 aaKnown RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 CYB561P49447 251 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 SSR4P51571 173 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 OC90Q02509 493 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 LTB4RQ15722 352 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 HSP90B2PQ58FF3 399 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF628Q5EBL2 1059 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 RPUSD3Q6P087 351 aaKnown RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 C16orf47Q6ZP98 133 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF605Q86T29 641 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 FAM9CQ8IZT9 166 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 HORMAD2Q8N7B1 307 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 PPCDCQ96CD2 204 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 MAGEB18Q96M61 343 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 SIGLEC12Q96PQ1 595 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 GLIPR2Q9H4G4 154 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 MED4Q9NPJ6 270 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 ANKRD10Q9NXR5 420 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 SH3BP4Q9P0V3 963 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 PCDHGB6Q9Y5F9 930 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 PCDHGA10Q9Y5H3 936 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 COL6A6A6NMZ7 2263 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 C2orf92A0A1B0GVN3 265 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 TTLL8A6PVC2 850 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF195O14628 629 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PLOD3O60568 738 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PRAMEF2O60811 474 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 SLITRK5O94991 958 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 CBX7O95931 251 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PCSK2P16519 638 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PRPS1L1P21108 318 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 NTSP30990 170 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 ST13P50502 369 aaKnown RBP16.49■□□□□ 0.23
SMIM4-202ENST00000476842 NCBP2P52298 156 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMIM4-202ENST00000476842 DIO3P55073 304 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 CLDN8P56748 225 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 C21orf58P58505 322 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PTGR1Q14914 329 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 EBPQ15125 230 aaKnown RBP16.49■□□□□ 0.23
SMIM4-202ENST00000476842 OR1C1Q15619 314 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 SPINK14Q6IE38 97 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 OGFOD2Q6N063 350 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 ANKRD26P1Q6NSI1 321 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 RGS9BPQ6ZS82 235 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PRICKLE2Q7Z3G6 844 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF227Q86WZ6 799 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 RIMKLAQ8IXN7 391 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 GPALPP1Q8IXQ4 340 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 TMEM156Q8N614 296 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 SLC15A4Q8N697 577 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 MDS2Q8NDY4 140 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 OR9A2Q8NGT5 310 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 MAELQ96JY0 434 aaKnown RBP16.49■□□□□ 0.23
SMIM4-202ENST00000476842 AMDHD1Q96NU7 426 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 RASL10BQ96S79 203 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 WWTR1Q9GZV5 400 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 EPN3Q9H201 632 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 WDR55Q9H6Y2 383 aaPredicted RBP16.49■□□□□ 0.23
SMIM4-202ENST00000476842 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 LUZP4Q9P127 313 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 LRFN1Q9P244 771 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 MAPRE3Q9UPY8 281 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 CFL2Q9Y281 166 aa16.49■□□□□ 0.23
SMIM4-202ENST00000476842 PLOD2O00469 737 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 SCAMP2O15127 329 aaKnown RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 PDPK1O15530 556 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 SLC28A2O43868 658 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 NEURL1O76050 574 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 EPHA3P29320 983 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 HPCAL1P37235 193 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 MRPS35P82673 323 aaKnown RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 DUSP8Q13202 625 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 EXOSC7Q15024 291 aaKnown RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF385BQ569K4 471 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 SPATA19Q7Z5L4 167 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 ARFGAP2Q8N6H7 521 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 NATD1Q8N6N6 113 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF441Q8N8Z8 693 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 C17orf47Q8NEP4 570 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 C16orf52Q8NHV5 167 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 KAT2AQ92830 837 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 COQ8BQ96D53 544 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 PRPF18Q99633 342 aaKnown RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 ACSS1Q9NUB1 689 aaPredicted RBP16.48■□□□□ 0.23
SMIM4-202ENST00000476842 BCAP29Q9UHQ4 241 aa16.48■□□□□ 0.23
SMIM4-202ENST00000476842 A0A087WV62 115 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF354AO60765 605 aaPredicted RBP16.47■□□□□ 0.23
SMIM4-202ENST00000476842 TGDSO95455 350 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 NADKO95544 446 aaPredicted RBP16.47■□□□□ 0.23
SMIM4-202ENST00000476842 SP1P08047 785 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 IFI6P09912 130 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 CD46P15529 392 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 EMDP50402 254 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 MLLT10P55197 1068 aa16.47■□□□□ 0.23
SMIM4-202ENST00000476842 INPP5JQ15735 1006 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms