RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SARGQ9BW04 601 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 IMP3Q9NV31 184 aaKnown RBP15.54■□□□□ 0.08
TMEM53-208ENST00000476724 NDRG2Q9UN36 371 aaKnown RBP15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SLC17A4Q9Y2C5 497 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 A0A1W2PPC1 479 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 METTL15A6NJ78 407 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TLR4O00206 839 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TAF4O00268 1085 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 MAN2B1O00754 1011 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 OR10H3O60404 316 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 PTHP01270 115 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 OR12D1P0DN82 309 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 NR2F1P10589 423 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 FUT4P22083 530 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 CDH3P22223 829 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TSFMP43897 325 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 KHKP50053 298 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 CRISP3P54108 245 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TFF2Q03403 129 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TMEM201Q5SNT2 666 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 MEDAGQ5VYS4 303 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 SLX4IPQ5VYV7 408 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 KIAA1324Q6UXG2 1013 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 Q7L0L9 218 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 XAGE5Q8WWM1 108 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 BBS4Q96RK4 519 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 C17orf62Q9BQA9 187 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 C1QTNF7Q9BXJ2 289 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 SLC25A19Q9HC21 320 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 ZBTB20Q9HC78 741 aaPredicted RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 ZCCHC3Q9NUD5 404 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 CCDC59Q9P031 241 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 IFT52Q9Y366 437 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 PCDHGA3Q9Y5H0 932 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 NINQ8N4C6 2090 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 PRR19A6NJB7 356 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 SLC31A1O15431 190 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 ZW10O43264 779 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 CEACAM5P06731 702 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 POU1F1P28069 291 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 ALDH6A1Q02252 535 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 COX10Q12887 443 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 DEF8Q6ZN54 512 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 Q6ZS52 159 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 AMER3Q8N944 861 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 FLCNQ8NFG4 579 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 FUZQ9BT04 418 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 NXF2Q9GZY0 626 aaKnown RBP15.53■□□□□ 0.08
TMEM53-208ENST00000476724 RACGAP1Q9H0H5 632 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 SERHL2Q9H4I8 314 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TRPC4Q9UBN4 977 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 KCNK6Q9Y257 313 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 SLC9A8Q9Y2E8 581 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 TRIOO75962 3097 aa15.53■□□□□ 0.08
TMEM53-208ENST00000476724 A0A1W2PRQ8 180 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 TCRBV21S2A2A0A5A6 115 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 PRICKLE3O43900 615 aaPredicted RBP15.52■□□□□ 0.08
TMEM53-208ENST00000476724 PORP16435 677 aaPredicted RBP15.52■□□□□ 0.08
TMEM53-208ENST00000476724 ACSL1P33121 698 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 CD97P48960 835 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 NCBP2P52298 156 aaKnown RBP eCLIP15.52■□□□□ 0.08
TMEM53-208ENST00000476724 LIMK1P53667 647 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 RELAQ04206 551 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 SEC23BQ15437 767 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 SYPL1Q16563 259 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 NDUFA9Q16795 377 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 UAP1L1Q3KQV9 507 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 PRAMEF8Q5VWM4 474 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 PRAMEF7Q5VXH5 474 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 C12orf73Q69YU5 71 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 C19orf48Q6RUI8 117 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 CASP12Q6UXS9 341 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 ZNF793Q6ZN11 406 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 OR52E1Q8NGJ3 308 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 VANGL1Q8TAA9 524 aaPredicted RBP15.52■□□□□ 0.08
TMEM53-208ENST00000476724 MS4A6EQ96DS6 147 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 POLR2J3Q9H1A7 115 aaKnown RBP15.52■□□□□ 0.08
TMEM53-208ENST00000476724 XKR8Q9H6D3 395 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 SNX11Q9Y5W9 270 aa15.52■□□□□ 0.08
TMEM53-208ENST00000476724 SEMA7AO75326 666 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 UGT2B17O75795 530 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 ACADMP11310 421 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 GABRG2P18507 467 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 HIST1H1TP22492 207 aaPredicted RBP15.52■□□□□ 0.07
TMEM53-208ENST00000476724 BCL6P41182 706 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 RGS19P49795 217 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 XKP51811 444 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 SLAMF1Q13291 335 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 NCF4Q15080 339 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 SMAD2Q15796 467 aaKnown RBP15.52■□□□□ 0.07
TMEM53-208ENST00000476724 EOGTQ5NDL2 527 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 MRM1Q6IN84 353 aaKnown RBP15.52■□□□□ 0.07
TMEM53-208ENST00000476724 PGBD2Q6P3X8 592 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 ABHD17CQ6PCB6 329 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 CD300LDQ6UXZ3 194 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 LACC1Q8IV20 430 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 OR2L5Q8NG80 312 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 OR8J1Q8NGP2 316 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 MGLLQ99685 303 aa15.52■□□□□ 0.07
TMEM53-208ENST00000476724 RSPO3Q9BXY4 272 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms