RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CASP3P42574 277 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 PCYT1AP49585 367 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 PHEXP78562 749 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 POU4F1Q01851 419 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 E2F2Q14209 437 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 MORF4L2Q15014 288 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 WIPI1Q5MNZ9 446 aaPredicted RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 DEPDC1Q5TB30 811 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 C6orf163Q5TEZ5 329 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 C18orf63Q68DL7 685 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 TIGD3Q6B0B8 471 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 C20orf204Q6ZNR8 217 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 YTHDF3Q7Z739 585 aaKnown RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 VWA5B2Q8N398 1253 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 ZNF441Q8N8Z8 693 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 FAM83FQ8NEG4 500 aaPredicted RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 OR1J4Q8NGS1 313 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 WNT2BQ93097 391 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 METTL7AQ9H8H3 244 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 PLAC1Q9HBJ0 212 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 LYARQ9NX58 379 aaKnown RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 PACSIN3Q9UKS6 424 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 TESMINQ9Y4I5 508 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 PSAT1Q9Y617 370 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 DOCK7Q96N67 2140 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 A8MXE2 369 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 SAP18O00422 153 aaKnown RBP11.48□□□□□ -0.57
SKA3-206ENST00000475251 GNB5O14775 395 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 SH3BGRLO75368 114 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 RHOXF2BP0C7M4 288 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 NR2F6P10588 404 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 PTPN6P29350 595 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 CPOXP36551 454 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 PIK3CBP42338 1070 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 NAGLUP54802 743 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 ARL4CP56559 192 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 ACKR1Q16570 336 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 HP1BP3Q5SSJ5 553 aaPredicted RBP11.48□□□□□ -0.57
SKA3-206ENST00000475251 DCST1Q5T197 706 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 FNDC7Q5VTL7 733 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 BICRALQ6AI39 1079 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 SLC30A6Q6NXT4 461 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 TMEM81Q6P7N7 255 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 CYP20A1Q6UW02 462 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 GALNT12Q8IXK2 581 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
SKA3-206ENST00000475251 OR7G3Q8NG95 312 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 ACTRT1Q8TDG2 376 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 ESAMQ96AP7 390 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 CD244Q9BZW8 370 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 OR51B5Q9H339 312 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 TXNDC16Q9P2K2 825 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 PTBP2Q9UKA9 531 aaKnown RBP11.48□□□□□ -0.57
SKA3-206ENST00000475251 RNF112Q9ULX5 631 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 FREM3P0C091 2139 aa11.48□□□□□ -0.57
SKA3-206ENST00000475251 INAFM1C9JVW0 142 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 MSTNO14793 375 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 CTIFO43310 598 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 CLPSP04118 112 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 CD1DP15813 335 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 NAGAP17050 411 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 EPORP19235 508 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 MC3RP41968 323 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 RPS13P62277 151 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 FOXF2Q12947 444 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 SNTA1Q13424 505 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 KBTBD12Q3ZCT8 623 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 FBXO48Q5FWF7 155 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 OR52E8Q6IFG1 317 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 GRHL2Q6ISB3 625 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 AAGABQ6PD74 315 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 TMEM64Q6YI46 380 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 YRDCQ86U90 279 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 INTS12Q96CB8 462 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 REPS1Q96D71 796 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 PERPQ96FX8 193 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 TUBA1CQ9BQE3 449 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 SORBS1Q9BX66 1292 aaKnown RBP11.47□□□□□ -0.57
SKA3-206ENST00000475251 ACTR8Q9H981 624 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 UBTD1Q9HAC8 227 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 MOCS1Q9NZB8 636 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 CFL2Q9Y281 166 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
SKA3-206ENST00000475251 PLPP1O14494 284 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 PRKRAO75569 313 aaKnown RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 CBR3O75828 277 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 WISP3O95389 354 aaPredicted RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 CRHP06850 196 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 EPB42P16452 691 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 STMN1P16949 149 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 PTX3P26022 381 aaPredicted RBP11.46□□□□□ -0.57
SKA3-206ENST00000475251 PIK3R1P27986 724 aa11.46□□□□□ -0.57
SKA3-206ENST00000475251 SSTR4P31391 388 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms