RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 COX20Q5RI15 118 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PRAMEF8Q5VWM4 474 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PRAMEF7Q5VXH5 474 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 CDCP2Q5VXM1 449 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 FAM180BQ6P0A1 224 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 ZCCHC12Q6PEW1 402 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 BHLHB9Q6PI77 547 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PIP4P1Q86T03 277 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 SPATA24Q86W54 205 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 IFNEQ86WN2 208 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 RNF130Q86XS8 419 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 SPPL2CQ8IUH8 684 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 ST13P4Q8IZP2 240 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-207ENST00000474825 LGI4Q8N135 537 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 CLEC4FQ8N1N0 589 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PQLC1Q8N2U9 271 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 TMEM102Q8N9M5 508 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-207ENST00000474825 C11orf65Q8NCR3 313 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 OR56A1Q8NGH5 318 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 OR51Q1Q8NH59 317 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 NETO1Q8TDF5 533 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 RHBDD1Q8TEB9 315 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 CANT1Q8WVQ1 401 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PYDC1Q8WXC3 89 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 CCDC74BQ96LY2 380 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 LRGUKQ96M69 825 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 NSMCE2Q96MF7 247 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 LRFN5Q96NI6 719 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 GFM1Q96RP9 751 aaKnown RBP6.2□□□□□ -1.42
ATG4A-207ENST00000474825 NDC1Q9BTX1 674 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 SERHL2Q9H4I8 314 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 MAGIXQ9H6Y5 334 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 FANCEQ9HB96 536 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 C3orf14Q9HBI5 128 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 BCL2L10Q9HD36 194 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 FBXO8Q9NRD0 319 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 SEMA4GQ9NTN9 838 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 GIN1Q9NXP7 522 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 DLL3Q9NYJ7 618 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 STOML1Q9UBI4 398 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 CDV3Q9UKY7 258 aaKnown RBP6.2□□□□□ -1.42
ATG4A-207ENST00000474825 C19orf53Q9UNZ5 99 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-207ENST00000474825 MAP4K5Q9Y4K4 846 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 MMACHCQ9Y4U1 282 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 AP4S1Q9Y587 144 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PCDHGA1Q9Y5H4 931 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 RP1P56715 2156 aa6.2□□□□□ -1.42
ATG4A-207ENST00000474825 PRAMEF27A3QJZ7 478 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 A8MU76 341 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 B4E171 279 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 TGFBR3LH3BV60 316 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HMGN4O00479 90 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CLDN4O14493 209 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 NVLO15381 856 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HNRNPRO43390 633 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PEX1O43933 1283 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 DPM1O60762 260 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 SOX30O94993 753 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 BMP10O95393 424 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 STAMBPO95630 424 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 RECKO95980 971 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CYC1P08574 325 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HBQ1P09105 142 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 C8orf89P0DMQ9 161 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ETFAP13804 333 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 NCK1P16333 377 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CHI3L1P36222 383 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 TSPAN7P41732 249 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MAGEA2P43356 314 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 STT3AP46977 705 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 DSTNP60981 165 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MRPS22P82650 360 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PRR5P85299 388 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MAT1AQ00266 395 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CDK6Q00534 326 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 E2F1Q01094 437 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MC2RQ01718 297 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HSPB3Q12988 150 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 SERTAD2Q14140 314 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CYP51A1Q16850 503 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 IQCCQ4KMZ1 466 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 GCNT6Q5T4J0 391 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 INTS11Q5TA45 600 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 DESI1Q6ICB0 168 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HEPHL1Q6MZM0 1159 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MFSD12Q6NUT3 480 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CYP2R1Q6VVX0 501 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ZNF517Q6ZMY9 492 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 QSOX2Q6ZRP7 698 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 FKBP9P1Q75LS8 142 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CBLL1Q75N03 491 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 COX15Q7KZN9 410 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 EIF3MQ7L2H7 374 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PIWIL3Q7Z3Z3 882 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 NAXDQ8IW45 347 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms