RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DRD4P21917 467 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 PIK3R1P27986 724 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 LSP1P33241 339 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 FRKP42685 505 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 GSTM5P46439 218 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ASMTP46597 345 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 CLDN8P56748 225 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 UFM1P61960 85 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 STX4Q12846 297 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SERTAD2Q14140 314 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TERF2Q15554 542 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 PRICKLE4Q2TBC4 344 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 EIF2S3LQ2VIR3 472 aaKnown RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TRMT12Q53H54 448 aaKnown RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF628Q5EBL2 1059 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 H3F3CQ6NXT2 135 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF551Q7Z340 670 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 FUNDC1Q8IVP5 155 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TMEM132CQ8N3T6 1108 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 GALNT11Q8NCW6 608 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 B3GNT7Q8NFL0 401 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ADCY4Q8NFM4 1077 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 FDCSPQ8NFU4 85 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 OR9I1Q8NGQ6 314 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 OR9A2Q8NGT5 310 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 CEP70Q8NHQ1 597 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SLC2A12Q8TD20 617 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ELP5Q8TE02 316 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 STON2Q8WXE9 905 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 COQ8BQ96D53 544 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ABHD17AQ96GS6 310 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SENP5Q96HI0 755 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 AMDHD1Q96NU7 426 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 CATSPER2Q96P56 530 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 LPAR4Q99677 370 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TUBB6Q9BUF5 446 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 NUDT9Q9BW91 350 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 FAIM2Q9BWQ8 316 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 GLIPR2Q9H4G4 154 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF385DQ9H6B1 395 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 REEP4Q9H6H4 257 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 WDR41Q9HAD4 459 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ZBTB20Q9HC78 741 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 MMP25Q9NPA2 562 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SLC52A3Q9NQ40 469 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TCF7L2Q9NQB0 619 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 PFDN4Q9NQP4 134 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SDR39U1Q9NRG7 319 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 MAT2BQ9NZL9 334 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 NOP53Q9NZM5 478 aaKnown RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF639Q9UID6 485 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 TUBD1Q9UJT1 453 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 G3BP2Q9UN86 482 aaKnown RBP6.5□□□□□ -1.37
LIMD1-204ENST00000474665 SPACA6W5XKT8 324 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 GTF3C1Q12789 2109 aa6.5□□□□□ -1.37
LIMD1-204ENST00000474665 NSG1A0A0A6YYJ2 146 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 A0A0G2JND7 137 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 A6NL46 340 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 PEX12O00623 359 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 UBDO15205 165 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 C1QCP02747 245 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 IFNA16P05015 189 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 VIMP08670 466 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 PORP16435 677 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 PCSK2P16519 638 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 CSNK2A2P19784 350 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 PRPS1L1P21108 318 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 GPX3P22352 226 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 MAPK1P28482 360 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 SSTR4P31391 388 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 GALNSP34059 522 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 SOX11P35716 441 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 MRPL19P49406 292 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 CDK9P50750 372 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 CCL11P51671 97 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 DGKQP52824 942 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 NME5P56597 212 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 SLC37A1P57057 533 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 MRPS35P82673 323 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 PLIN5Q00G26 463 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 ACTN3Q08043 901 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 FUT7Q11130 342 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 MAP4K2Q12851 820 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 KLRB1Q12918 225 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 AIMP2Q13155 320 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 RAPSNQ13702 412 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 HEPACAMQ14CZ8 416 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 EXOSC7Q15024 291 aaKnown RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 SPRED3Q2MJR0 410 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 BTBD16Q32M84 506 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 B3GNTL1Q67FW5 361 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 FCRLBQ6BAA4 426 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 NXNQ6DKJ4 435 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 C16orf47Q6ZP98 133 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-204ENST00000474665 SPATA19Q7Z5L4 167 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 CAMKMTQ7Z624 323 aa6.49□□□□□ -1.37
LIMD1-204ENST00000474665 C9orf40Q8IXQ3 194 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms