RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, human

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-206	ENST00000473684	HSDL1	Q3SXM5	330 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PRAMEF19	Q5SWL8	479 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	GPRC6A	Q5T6X5	926 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LIPN	Q5VXI9	398 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	HIST2H2AA3	Q6FI13	130 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CLEC2A	Q6UVW9	174 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	UNQ6494/PRO21346	Q6UXR6	183 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SLC26A9	Q7LBE3	791 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PHF13	Q86YI8	300 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	KLB	Q86Z14	1044 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SVBP	Q8N300	66 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	NIPA2	Q8N8Q9	360 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	L3MBTL4	Q8NA19	623 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	OR2L5	Q8NG80	312 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	OR2T11	Q8NH01	316 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	POC1B	Q8TC44	478 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SNX33	Q8WV41	574 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TMEM125	Q96AQ2	219 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TIFA	Q96CG3	184 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LRRC58	Q96CX6	371 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	RTP4	Q96DX8	246 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	HIST1H2AH	Q96KK5	128 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	OR2M2	Q96R28	347 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	GFM1	Q96RP9	751 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	HIST1H2AJ	Q99878	128 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PINK1	Q9BXM7	581 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ACE2	Q9BYF1	805 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	OR51E2	Q9H255	320 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	RIMS4	Q9H426	269 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	NMRK2	Q9NPI5	230 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ZFP57	Q9NU63	452 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	NLK	Q9UBE8	527 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ZNF69	Q9UC07	566 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SH3BGRL2	Q9UJC5	107 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TUBD1	Q9UJT1	453 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ZNF222	Q9UK12	451 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CDH10	Q9Y6N8	788 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PRAMEF33	A0A0G2JMD5	474 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	BCLAF3	A2AJT9	711 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	C3orf70	A6NLC5	250 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684		M0QYV0	167 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PRAMEF10	O60809	474 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SDC3	O75056	442 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SEC22B	O75396	215 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	RECQL5	O94762	991 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CRYBA1	P05813	215 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	POLB	P06746	335 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CNP	P09543	421 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	RNH1	P13489	461 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	IL2RB	P14784	551 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TPSB2	P20231	275 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	DCD	P81605	110 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PURA	Q00577	322 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	E2F1	Q01094	437 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	DHODH	Q02127	395 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LIPE	Q05469	1076 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TPSAB1	Q15661	275 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SNAPC1	Q16533	368 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PYDC2	Q56P42	97 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CELF3	Q5SZQ8	465 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ADGRF1	Q5T601	910 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MLIP	Q5VWP3	458 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ANKS6	Q68DC2	871 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	DENND1B	Q6P3S1	775 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	METAP1D	Q6UB28	335 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TEPP	Q6URK8	271 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MOB2	Q70IA6	237 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ZNF367	Q7RTV3	350 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LAX1	Q8IWV1	398 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ADHFE1	Q8IWW8	467 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LPAR1	Q92633	364 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	KAT2A	Q92830	837 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	HAS1	Q92839	578 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CHFR	Q96EP1	664 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SCRN2	Q96FV2	425 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SLC2A13	Q96QE2	648 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CPNE1	Q99829	537 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	ZNF700	Q9H0M5	742 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	RNF122	Q9H9V4	155 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MPP6	Q9NZW5	540 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	NUBP2	Q9Y5Y2	271 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CLCA3P	Q9Y6N3	262 aa		4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	DDX60L	Q5H9U9	1706 aa	Known RBP	4.87	□□□□□ -1.63
TMEM39A-206	ENST00000473684	KAT6A	Q92794	2004 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MEIKIN	A0A087WXM9	373 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	TRAV19	A0A0A6YYK7	116 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	WASH3P	C4AMC7	463 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684		E9PI62	339 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	SGK494	L7N484	410 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	CASC3	O15234	703 aa	Known RBP	4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PSMD3	O43242	534 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	PLOD3	O60568	738 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	WBP4	O75554	376 aa	Known RBP	4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	MED6	O75586	246 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	KDM4B	O94953	1096 aa		4.86	□□□□□ -1.63
TMEM39A-206	ENST00000473684	LY86	O95711	162 aa		4.86	□□□□□ -1.63

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