RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GALNT1Q10472 559 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 TBCELQ5QJ74 424 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 LGSNQ5TDP6 509 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 LETMD1Q6P1Q0 360 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 TMEM64Q6YI46 380 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 B3GNT6Q6ZMB0 384 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 TIFABQ6ZNK6 161 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 RPS27LQ71UM5 84 aaKnown RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 C17orf47Q8NEP4 570 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 OR7G1Q8NGA0 311 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 UHMK1Q8TAS1 419 aaKnown RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 ADIPOR1Q96A54 375 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 BRF2Q9HAW0 419 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 FARSBQ9NSD9 589 aaKnown RBP14.05□□□□□ -0.16
VTI1A-203ENST00000472892 SPRR3Q9UBC9 169 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF225Q9UK10 706 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 PCDHA9Q9Y5H5 950 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 NPFFR2Q9Y5X5 522 aa14.05□□□□□ -0.16
VTI1A-203ENST00000472892 A0A0G2JNJ9 132 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 C1orf226A1L170 272 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 A8MT66 165 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 TP53I11O14683 189 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 GABRA1P14867 456 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 PORP16435 677 aaPredicted RBP14.04□□□□□ -0.16
VTI1A-203ENST00000472892 GCAP28676 217 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 HSD17B3P37058 310 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 ZFP36L2P47974 494 aaKnown RBP14.04□□□□□ -0.16
VTI1A-203ENST00000472892 MAPK12P53778 367 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 MGAT2Q10469 447 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 HLA-DQA1Q5Y7H0 255 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SLC48A1Q6P1K1 146 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 COMMD6Q7Z4G1 85 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 DMRTC2Q8IXT2 367 aaPredicted RBP14.04□□□□□ -0.16
VTI1A-203ENST00000472892 OR10Q1Q8NGQ4 319 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SPPL2AQ8TCT8 520 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SELENOMQ8WWX9 145 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 DIO2Q92813 273 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 TM4SF18Q96CE8 201 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 NTNG2Q96CW9 530 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SECISBP2Q96T21 854 aaKnown RBP14.04□□□□□ -0.16
VTI1A-203ENST00000472892 DOHHQ9BU89 302 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 EXO5Q9H790 373 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 Q9UFV3 132 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 TRPS1Q9UHF7 1281 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SNX6Q9UNH7 406 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 SLC12A4Q9UP95 1085 aa14.04□□□□□ -0.16
VTI1A-203ENST00000472892 PHF3Q92576 2039 aaKnown RBP14.03□□□□□ -0.16
VTI1A-203ENST00000472892 SNX4O95219 450 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 LRATO95237 230 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 ABHD2P08910 425 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 TSPAN8P19075 237 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 NT5EP21589 574 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 ADH7P40394 386 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 FBXW4P57775 412 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 CLCQ05315 142 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 MAP4K2Q12851 820 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 C1orf185Q5T7R7 199 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 TMEM198Q66K66 360 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 NEIL3Q8TAT5 605 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 JSRP1Q96MG2 331 aaPredicted RBP14.03□□□□□ -0.16
VTI1A-203ENST00000472892 ANGPTL4Q9BY76 406 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 B4GALT7Q9UBV7 327 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 ZNF639Q9UID6 485 aa14.03□□□□□ -0.16
VTI1A-203ENST00000472892 EXOC1LA0A1B0GW35 172 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 GOLGA6L10A6NI86 522 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 OR4F21O95013 312 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 ATP1B1P05026 303 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 HOXB1P14653 301 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-203ENST00000472892 NAGAP17050 411 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 CSNK2A2P19784 350 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-203ENST00000472892 GPX3P22352 226 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 DEKP35659 375 aaKnown RBP14.02□□□□□ -0.17
VTI1A-203ENST00000472892 SOX18P35713 384 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 NRG3P56975 720 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 TRA2BP62995 288 aaKnown RBP14.02□□□□□ -0.17
VTI1A-203ENST00000472892 PRICKLE4Q2TBC4 344 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 UNC50Q53HI1 259 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 TEX35Q5T0J7 233 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 FNDC7Q5VTL7 733 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 LCA5Q86VQ0 697 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 LIX1LQ8IVB5 337 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 MTBPQ96DY7 904 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 SLC6A15Q9H2J7 730 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 TMEM216Q9P0N5 145 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 VPS29Q9UBQ0 182 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 PSME2Q9UL46 239 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 NFU1Q9UMS0 254 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 HCFC1P51610 2035 aa14.02□□□□□ -0.17
VTI1A-203ENST00000472892 POLQO75417 2590 aa14.01□□□□□ -0.17
VTI1A-203ENST00000472892 FAM47E-STBD1D6RA91 191 aa14.01□□□□□ -0.17
VTI1A-203ENST00000472892 MANBAO00462 879 aa14.01□□□□□ -0.17
VTI1A-203ENST00000472892 DLX3O60479 287 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms