RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TBC1D10CQ8IV04 446 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 FAM86B1Q8N7N1 296 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 OR1L6Q8NGR2 347 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CHPT1Q8WUD6 406 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 SARAFQ96BY9 339 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 COQ8BQ96D53 544 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 UBAC1Q9BSL1 405 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 NUSAP1Q9BXS6 441 aaKnown RBP2.39□□□□□ -2.03
XRN1-210ENST00000472697 ZMYND12Q9H0C1 365 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ACTL8Q9H568 366 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 ZCCHC4Q9H5U6 513 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 C1orf123Q9NWV4 160 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CHMP2BQ9UQN3 213 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 MAB21L2Q9Y586 359 aa2.39□□□□□ -2.03
XRN1-210ENST00000472697 CLSPNQ9HAW4 1339 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ZNF646O15015 1829 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 A0A1W2PRB8 838 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 RNF13O43567 381 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 SDC3O75056 442 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 LCKP06239 509 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CA4P22748 312 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PTGS2P35354 604 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 MAGEA11P43364 429 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 BDKRB1P46663 353 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CSNK1EP49674 416 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 DNA2P51530 1060 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CCR4P51679 360 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 HADHBP55084 474 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 SEC61BP60468 96 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 CCZ1BP86790 482 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CCZ1P86791 482 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 ZNF155Q12901 538 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 DOC2AQ14183 400 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 LY6G5CQ5SRR4 150 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 IL23RQ5VWK5 629 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 OLFML1Q6UWY5 402 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 KIF6Q6ZMV9 814 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 Q71RC1 249 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 TAS2R42Q7RTR8 314 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 YTHDF3Q7Z739 585 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 ANKFN1Q8N957 763 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PAPD5Q8NDF8 572 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 OR5M9Q8NGP3 310 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 TMED6Q8WW62 240 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ST8SIA1Q92185 356 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 NCLNQ969V3 563 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ADIPOR1Q96A54 375 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PHF21BQ96EK2 531 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PGM2Q96G03 612 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 COQ10AQ96MF6 247 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 RPRD1AQ96P16 312 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 TSSK2Q96PF2 358 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 UHRF2Q96PU4 802 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 MTMR9Q96QG7 549 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 USP28Q96RU2 1077 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 POLR3CQ9BUI4 534 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 LRRC2Q9BYS8 371 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 NEUROG2Q9H2A3 272 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 R3HDMLQ9H3Y0 253 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 NCOR1P1Q9H4R4 102 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 MRPL47Q9HD33 250 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 AGPAT3Q9NRZ7 376 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FAM207AQ9NSI2 230 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 BARHL2Q9NY43 387 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PILRBQ9UKJ0 227 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 LTN1O94822 1766 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 USP47Q96K76 1375 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 MAP3K19Q56UN5 1328 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 KDM3BQ7LBC6 1761 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ATP6AP2A0A1C7CYW4 349 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ESYT2A0FGR8 921 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FAM149AA5PLN7 773 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 A8MU76 341 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 A8MUI8 341 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 M0R296 226 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 SH2D1BO14796 132 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 WNT9BO14905 357 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CTAGE5O15320 804 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ARHGEF9O43307 516 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 KCNAB3O43448 404 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 EXTL3O43909 919 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 NME2P1O60361 137 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 EML2O95834 649 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 NPPAP01160 153 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ATP1B1P05026 303 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PNMTP11086 282 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ETS2P15036 469 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ZNF18P17022 549 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 HOXD10P28358 340 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 GRIA1P42261 906 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 EWSR1Q01844 656 aaKnown RBP eCLIP2.38□□□□□ -2.03
XRN1-210ENST00000472697 ITPK1Q13572 414 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ACCSLQ4AC99 568 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FNBP1LQ5T0N5 605 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FUT10Q6P4F1 479 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 SLC25A47Q6Q0C1 308 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ADAMTSL5Q6ZMM2 481 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 EXOC3L1Q86VI1 746 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CBWD2Q8IUF1 395 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CIARTQ8N365 385 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms