RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNF619Q8N2I2 560 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 LRRC43Q8N309 656 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 GPR137CQ8N3F9 429 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 GVQW1Q8N7I0 195 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 ZNF671Q8TAW3 534 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 GANCQ8TET4 914 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 FAM122AQ96E09 287 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 C16orf58Q96GQ5 468 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 FER1L6-AS2Q96M78 137 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 DESI2Q9BSY9 194 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 VPS37BQ9H9H4 285 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 MLXQ9UH92 298 aa3.01□□□□□ -1.93
CD46-213ENST00000471987 IGHV3OR16-12A0A075B7B8 117 aa3□□□□□ -1.93
CD46-213ENST00000471987 C5orf52A6NGY3 159 aa3□□□□□ -1.93
CD46-213ENST00000471987 KIF2AO00139 706 aaPredicted RBP3□□□□□ -1.93
CD46-213ENST00000471987 SLC33A1O00400 549 aaPredicted RBP3□□□□□ -1.93
CD46-213ENST00000471987 SLC7A4O43246 635 aa3□□□□□ -1.93
CD46-213ENST00000471987 CSDE1O75534 798 aaKnown RBP3□□□□□ -1.93
CD46-213ENST00000471987 PALMO75781 387 aa3□□□□□ -1.93
CD46-213ENST00000471987 HSPA4LO95757 839 aa3□□□□□ -1.93
CD46-213ENST00000471987 ACTL6AO96019 429 aa3□□□□□ -1.93
CD46-213ENST00000471987 RHOXF2BP0C7M4 288 aa3□□□□□ -1.93
CD46-213ENST00000471987 MDKP21741 143 aaPredicted RBP3□□□□□ -1.93
CD46-213ENST00000471987 PTAFRP25105 342 aa3□□□□□ -1.93
CD46-213ENST00000471987 RDXP35241 583 aaKnown RBP3□□□□□ -1.93
CD46-213ENST00000471987 NPBWR1P48145 328 aa3□□□□□ -1.93
CD46-213ENST00000471987 RAD23AP54725 363 aa3□□□□□ -1.93
CD46-213ENST00000471987 CTAG1AP78358 180 aa3□□□□□ -1.93
CD46-213ENST00000471987 UBXN1Q04323 297 aa3□□□□□ -1.93
CD46-213ENST00000471987 CCDC173Q0VFZ6 552 aa3□□□□□ -1.93
CD46-213ENST00000471987 ZSCAN26Q16670 478 aa3□□□□□ -1.93
CD46-213ENST00000471987 MICAQ29983 383 aa3□□□□□ -1.93
CD46-213ENST00000471987 PPP1R42Q7Z4L9 355 aa3□□□□□ -1.93
CD46-213ENST00000471987 APOBEC3FQ8IUX4 373 aaKnown RBP3□□□□□ -1.93
CD46-213ENST00000471987 KRT222Q8N1A0 295 aa3□□□□□ -1.93
CD46-213ENST00000471987 ICA1LQ8NDH6 482 aa3□□□□□ -1.93
CD46-213ENST00000471987 ZNF540Q8NDQ6 660 aa3□□□□□ -1.93
CD46-213ENST00000471987 CCDC148Q8NFR7 591 aa3□□□□□ -1.93
CD46-213ENST00000471987 SAP25Q8TEE9 199 aa3□□□□□ -1.93
CD46-213ENST00000471987 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3□□□□□ -1.93
CD46-213ENST00000471987 JAKMIP1Q96N16 626 aaKnown RBP3□□□□□ -1.93
CD46-213ENST00000471987 OR5M11Q96RB7 305 aa3□□□□□ -1.93
CD46-213ENST00000471987 FERMT1Q9BQL6 677 aa3□□□□□ -1.93
CD46-213ENST00000471987 RHOXF2Q9BQY4 288 aa3□□□□□ -1.93
CD46-213ENST00000471987 C2orf40Q9H1Z8 148 aa3□□□□□ -1.93
CD46-213ENST00000471987 IL20Q9NYY1 176 aa3□□□□□ -1.93
CD46-213ENST00000471987 SPG21Q9NZD8 308 aa3□□□□□ -1.93
CD46-213ENST00000471987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3□□□□□ -1.93
CD46-213ENST00000471987 CCDC169A6NNP5 214 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 EFCAB7A8K855 629 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 RSPH10B2B2RC85 870 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 H0Y626 953 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 H0YHG0 523 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 M0R296 226 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CACNB4O00305 520 aaPredicted RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 RTN2O75298 545 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CSO75390 466 aaKnown RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 GOSR1O95249 250 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 SMC2O95347 1197 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 YEATS4O95619 227 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 PAHP00439 452 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 RSPH10BP0C881 870 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 ATP5DP30049 168 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 RPL27P61353 136 aaKnown RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 FKBP1BP68106 108 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 IL1RL1Q01638 556 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 AP1B1Q10567 949 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 PPP1R7Q15435 360 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 WDR25Q64LD2 544 aaPredicted RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 PM20D1Q6GTS8 502 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 C11orf88Q6PI97 169 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 GBP6Q6ZN66 633 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CCDC80Q76M96 950 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 TMEM110Q86TL2 294 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 UNC45BQ8IWX7 931 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 PEX5LQ8IYB4 626 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 SPERTQ8NA61 448 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 FAM184AQ8NB25 1140 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 SETD7Q8WTS6 366 aaKnown RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 EXOC4Q96A65 974 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 C8orf76Q96K31 380 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CNDP1Q96KN2 507 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CASD1Q96PB1 797 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 RBM14Q96PK6 669 aaKnown RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 SH3GL1Q99961 368 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CAPS2Q9BXY5 557 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 NACA2Q9H009 215 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 NT5C3AQ9H0P0 336 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 IKZF5Q9H5V7 419 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 GRPEL1Q9HAV7 217 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 PFDN4Q9NQP4 134 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 TMEM9Q9P0T7 183 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 EIF3KQ9UBQ5 218 aaKnown RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 EXTL2Q9UBQ6 330 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 HPCAL4Q9UM19 191 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 CAB39Q9Y376 341 aaPredicted RBP2.99□□□□□ -1.93
CD46-213ENST00000471987 SCRIBQ14160 1630 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 PEG3Q9GZU2 1588 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 TNRQ92752 1358 aa2.99□□□□□ -1.93
CD46-213ENST00000471987 HTR3EA5X5Y0 456 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms