RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PLXDC1Q8IUK5 500 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 MCATQ8IVS2 390 aaKnown RBP16.44■□□□□ 0.22
HSPG2-208ENST00000471322 SVOPLQ8N434 492 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 MARVELD2Q8N4S9 558 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 LZICQ8WZA0 190 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 MAL2Q969L2 176 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 SDCCAG3Q96C92 435 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CD180Q99467 661 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 NPLQ9BXD5 320 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CHRNA10Q9GZZ6 450 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 A4GALTQ9NPC4 353 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 KCMF1Q9P0J7 381 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 EPHA6Q9UF33 1036 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 PISDQ9UG56 409 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 LOC400499M0QZD8 3231 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 GLOD5A6NK44 160 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 SOCS2O14508 198 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 ZNF23P17027 643 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 CDK9P50750 372 aaKnown RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 CLCN2P51788 898 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 LIM2P55344 173 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 VSX2P58304 361 aaPredicted RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 SKP1P63208 163 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 MRPS35P82673 323 aaKnown RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 EEF1A2Q05639 463 aaKnown RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 CYBRD1Q53TN4 286 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 CEACAM20Q6UY09 585 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 PATL1Q86TB9 770 aaKnown RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 ZDHHC13Q8IUH4 622 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 EPHX4Q8IUS5 362 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 ZDHHC21Q8IVQ6 265 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 METTL25Q8N6Q8 603 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 UCN3Q969E3 161 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 TBC1D20Q96BZ9 403 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 NXPE2Q96DL1 559 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 ZDHHC12Q96GR4 267 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 LIN37Q96GY3 246 aaPredicted RBP16.43■□□□□ 0.22
HSPG2-208ENST00000471322 DOHHQ9BU89 302 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 NRSN2Q9GZP1 204 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 POLR1BQ9H9Y6 1135 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 NTN4Q9HB63 628 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 DAPP1Q9UN19 280 aa16.43■□□□□ 0.22
HSPG2-208ENST00000471322 C7orf72A4D263 438 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 TMEM247A6NEH6 219 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 SLC9B1P1A6NJY1 282 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 PLD2O14939 933 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 PRAMEF10O60809 474 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 TNFSF15O95150 251 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 JMJD7P0C870 316 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 ETV5P41161 510 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 MAPK10P53779 464 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 CRB2Q5IJ48 1285 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 REEP3Q6NUK4 255 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 PIWIL3Q7Z3Z3 882 aaKnown RBP16.42■□□□□ 0.22
HSPG2-208ENST00000471322 ZC3H7AQ8IWR0 971 aaKnown RBP16.42■□□□□ 0.22
HSPG2-208ENST00000471322 CARFQ8N187 725 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 DNAJC22Q8N4W6 341 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 OR56A1Q8NGH5 318 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 WDR36Q8NI36 951 aaKnown RBP16.42■□□□□ 0.22
HSPG2-208ENST00000471322 NFKBIDQ8NI38 313 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 TMBIM1Q969X1 311 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 RNF31Q96EP0 1072 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 CNRIP1Q96F85 164 aaPredicted RBP16.42■□□□□ 0.22
HSPG2-208ENST00000471322 CMKLR1Q99788 373 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 CCDC86Q9H6F5 360 aaKnown RBP16.42■□□□□ 0.22
HSPG2-208ENST00000471322 OCIAD1Q9NX40 245 aa16.42■□□□□ 0.22
HSPG2-208ENST00000471322 C5orf58C9J3I9 102 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 G3V2T6 193 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PDLIM1O00151 329 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 UPK1AO00322 258 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 FABP3P05413 133 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 FHP07954 510 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 CSTF2P33240 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 SELENOWP63302 87 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PRR5P85299 388 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 RUNX2Q13950 521 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 RTP5Q14D33 572 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PDK3Q15120 406 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 CLPPQ16740 277 aaPredicted RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 CCDC116Q8IYX3 515 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 OR4K14Q8NGD5 310 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 HSH2DQ96JZ2 352 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 ZNF681Q96N22 645 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 MAP3K3Q99759 626 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 OSBPL10Q9BXB5 764 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 C3orf14Q9HBI5 128 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 ZCCHC3Q9NUD5 404 aaKnown RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 MN1Q10571 1320 aaPredicted RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 IGHV5-51A0A0C4DH38 117 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 TLCD2A6NGC4 264 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 GALR3O60755 368 aaPredicted RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 DPM1O60762 260 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PRKRAO75569 313 aaKnown RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 PDE9AO76083 593 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 C9P02748 559 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 SEMG1P04279 462 aa16.41■□□□□ 0.22
HSPG2-208ENST00000471322 NUP214P35658 2090 aaPredicted RBP16.41■□□□□ 0.22
HSPG2-208ENST00000471322 CASP9P55211 416 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms