RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DNAJC12Q9UKB3 198 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 BZW2Q9Y6E2 419 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 FAM169AQ9Y6X4 670 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 PDCD11Q14690 1871 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 PTPRJQ12913 1337 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 LOC105371242A0A075B767 164 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 A8MV72 311 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 PIRO00625 290 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 PTGESO14684 152 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 DDHD2O94830 711 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 SLU7O95391 586 aaKnown RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 IGHEP01854 428 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 FERP16591 822 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 DNASE1P24855 282 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 MYL6P60660 151 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 YWHAEP62258 255 aaKnown RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF699Q32M78 642 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 PRR27Q6MZM9 219 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 PET117Q6UWS5 81 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 LEKR1Q6ZMV7 388 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 FAM47EQ6ZV65 393 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 MMD2Q8IY49 270 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 CFAP61Q8NHU2 1237 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 URGCPQ8TCY9 931 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 TOP1MTQ969P6 601 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 C18orf25Q96B23 403 aaPredicted RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 HPDLQ96IR7 371 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 LPAR4Q99677 370 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 RAB11FIP5Q9BXF6 653 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 DNAI2Q9GZS0 605 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 CYP3A43Q9HB55 503 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 XAB2Q9HCS7 855 aaKnown RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 ANAPC5Q9UJX4 755 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 PPIEQ9UNP9 301 aaKnown RBP4.53□□□□□ -1.68
CCDC39-202ENST00000471307 RALGAPA2Q2PPJ7 1873 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 TANC1Q9C0D5 1861 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 MICAL3Q7RTP6 2002 aa4.53□□□□□ -1.68
CCDC39-202ENST00000471307 SCN1AP35498 2009 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 A0A1W2PPQ1 181 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 ARHGEF37A1IGU5 675 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 F8VZ95 297 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 GJB3O75712 270 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CEACAM4O75871 244 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 SERPING1P05155 500 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 RAB40ALP0C0E4 278 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 SKILP12757 684 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 STMN1P16949 149 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 ANXA13P27216 316 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PTGER4P35408 488 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PRKCIP41743 596 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 TNNC1P63316 161 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 NOP14P78316 857 aaKnown RBP4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PAX8Q06710 450 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CUL2Q13617 745 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 UPP1Q16831 310 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 GLRA4Q5JXX5 417 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CLLU1OSQ5K130 101 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 GARNL3Q5VVW2 1013 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 WDR59Q6PJI9 974 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 DCLRE1AQ6PJP8 1040 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 DNAAF5Q86Y56 855 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 FAM71AQ8IYT1 594 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CCDC170Q8IYT3 715 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 POGLUT1Q8NBL1 392 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 SPATA18Q8TC71 538 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 SHC3Q92529 594 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 BADQ92934 168 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 C4orf45Q96LM5 186 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 ZNF560Q96MR9 790 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 AGAP4Q96P64 663 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CASD1Q96PB1 797 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 SOSTQ9BQB4 213 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PI4K2AQ9BTU6 479 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 CXCL16Q9H2A7 254 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PDE7BQ9NP56 450 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 PRR34Q9NV39 138 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 GDAP2Q9NXN4 497 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 TUBGCP4Q9UGJ1 667 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 KIAA1257Q9ULG3 409 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 TP53TG3Q9ULZ0 132 aa4.52□□□□□ -1.69
CCDC39-202ENST00000471307 MKI67P46013 3256 aaKnown RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 ALPK3Q96L96 1907 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 H0Y626 953 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 UBE2CO00762 179 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TEX28O15482 410 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 TRAPPC3O43617 180 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 HUS1O60921 280 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 IGHV3-13P01766 116 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 PAEPP09466 180 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 MYBL1P10243 752 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 PRKAR1AP10644 381 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 CYLC1P35663 651 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-202ENST00000471307 LHX1P48742 406 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 RAD23AP54725 363 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 KLHL30Q0D2K2 578 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 INCA1Q0VD86 236 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 KYNUQ16719 465 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 C9orf152Q5JTZ5 239 aa4.51□□□□□ -1.69
CCDC39-202ENST00000471307 SPOPLQ6IQ16 392 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms