RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TCP10LQ8TDR4 215 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ACMSDQ8TDX5 336 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 C7orf26Q96N11 449 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 MANSC1Q9H8J5 431 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ZBTB26Q9HCK0 441 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 BATF3Q9NR55 127 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 SACM1LQ9NTJ5 587 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 DEPPQ9NTK1 212 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 GRID1Q9ULK0 1009 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 A0A1W2PR48 441 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 COPEO14579 308 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 BIRC5O15392 142 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 TMPRSS11DO60235 418 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 OR10H2O60403 315 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 GUCY1B2O75343 617 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 EEDO75530 441 aaKnown RBP12.48□□□□□ -0.41
HMGN1-211ENST00000471260 CLDN14O95500 239 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 P04436 131 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 RPS17P08708 135 aaKnown RBP12.48□□□□□ -0.41
HMGN1-211ENST00000471260 SLC35E2P0CK97 266 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 PTGER4P35408 488 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 HSF1Q00613 529 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 PLGLB1Q02325 96 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 TRAF3Q13114 568 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 TMEM211Q6ICI0 200 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 SH2D5Q6ZV89 423 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 SLC29A4Q7RTT9 530 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 FGD2Q7Z6J4 655 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 C9orf40Q8IXQ3 194 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 ARHGAP24Q8N264 748 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 RIT1Q92963 219 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
HMGN1-211ENST00000471260 CDK15Q96Q40 435 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 DMRTA2Q96SC8 542 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 ZDHHC11Q9H8X9 412 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 IL1RL2Q9HB29 575 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 NMRK1Q9NWW6 199 aa12.48□□□□□ -0.41
HMGN1-211ENST00000471260 ARHGAP10A1A4S6 786 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 OR14I1A6ND48 311 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 FOXO6A8MYZ6 492 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGN1-211ENST00000471260 CCDC22O60826 627 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-211ENST00000471260 AIFM1O95831 613 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 TPOP07202 933 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 RFC3P40938 356 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 SERPINB4P48594 390 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 PPIAP62937 165 aaKnown RBP12.47□□□□□ -0.41
HMGN1-211ENST00000471260 ASPHQ12797 758 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF750Q32MQ0 723 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 OR52E8Q6IFG1 317 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 RNF111Q6ZNA4 994 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 METTL4Q8N3J2 472 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 TMEM151AQ8N4L1 468 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 OR4F6Q8NGB9 312 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 TP53INP1Q96A56 240 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 MTFMTQ96DP5 389 aaKnown RBP12.47□□□□□ -0.41
HMGN1-211ENST00000471260 TTTY12Q9BZ98 90 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 ELOVL6Q9H5J4 265 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 RNPEPL1Q9HAU8 725 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 SH2D2AQ9NP31 389 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 SNX6Q9UNH7 406 aa12.47□□□□□ -0.41
HMGN1-211ENST00000471260 A8MT66 165 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 VGLL3A8MV65 326 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ADAM10O14672 748 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF354AO60765 605 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 IGHG3P01860 377 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 KLK1P06870 262 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 SBK3P0C264 359 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 CALB2P22676 271 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 PIK3R1P27986 724 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 GRNP28799 593 aaKnown RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 SERPINB3P29508 390 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ARFIP2P53365 341 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 SLC37A1P57057 533 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 HERVK_113P63132 956 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ERVK-8P63133 956 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF267Q14586 743 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 FAM109AQ8N4B1 249 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 PAQR8Q8TEZ7 354 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 SPACA9Q96E40 222 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 NSUN5Q96P11 429 aaKnown RBP12.46□□□□□ -0.41
HMGN1-211ENST00000471260 CNPPD1Q9BV87 410 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 ERVK-6Q9BXR3 956 aa12.46□□□□□ -0.41
HMGN1-211ENST00000471260 TP63Q9H3D4 680 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms