RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 RBBP4Q09028 425 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ZNF267Q14586 743 aaPredicted RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 ELAVL1Q15717 326 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 LTB4RQ15722 352 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 INTS11Q5TA45 600 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 SAXO2Q658L1 398 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PGM2L1Q6PCE3 622 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 TMEM151BQ8IW70 566 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SLC30A8Q8IWU4 369 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 CLEC4FQ8N1N0 589 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 C11orf65Q8NCR3 313 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PLPP5Q8NEB5 264 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 OR14A16Q8NHC5 309 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ADAMTS14Q8WXS8 1223 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 POP5Q969H6 163 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 FAM162AQ96A26 154 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 REXO5Q96IC2 774 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 RSRC1Q96IZ7 334 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 VPS50Q96JG6 964 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 TRIM8Q9BZR9 551 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 B3GNT4Q9C0J1 378 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 VN1R1Q9GZP7 353 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 CHST8Q9H2A9 424 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SOX17Q9H6I2 414 aaPredicted RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 POLR1BQ9H9Y6 1135 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ADAP2Q9NPF8 381 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 EQTNQ9NQ60 294 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 NECTIN3Q9NQS3 549 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 LANCL2Q9NS86 450 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SLC6A13Q9NSD5 602 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SIRT3Q9NTG7 399 aaPredicted RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 EXD2Q9NVH0 621 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 COPS7AQ9UBW8 275 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 CD300AQ9UGN4 299 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 POMPQ9Y244 141 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ANGPT4Q9Y264 503 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 CFL2Q9Y281 166 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PCDHGA8Q9Y5G5 932 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SNX13Q9Y5W8 968 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 GMEB1Q9Y692 573 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 FRYLO94915 3013 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 DNAH14Q0VDD8 3507 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ASCC3Q8N3C0 2202 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 MDC1Q14676 2089 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 FAM149AA5PLN7 773 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 STMND1H3BQB6 276 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 UPK1AO00322 258 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 TM4SF5O14894 197 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 PRAMEF2O60811 474 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ALOX12BO75342 701 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 IFNA14P01570 189 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 IGHEP01854 428 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 HMGN2P05204 90 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 ETFAP13804 333 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 HOXB9P17482 250 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 CD82P27701 267 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 SOX11P35716 441 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 MRPS35P82673 323 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 RHAGQ02094 409 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 DUSP2Q05923 314 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 MAP4K2Q12851 820 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ZNF155Q12901 538 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 SELPLGQ14242 412 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 LASP1Q14847 261 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 NCF4Q15080 339 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 NKG7Q16617 165 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 ZNF630Q2M218 657 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 PRICKLE4Q2TBC4 344 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ZNF628Q5EBL2 1059 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ZNF385CQ66K41 422 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 CPZQ66K79 652 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 FAAH2Q6GMR7 532 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 TNFAIP8L2Q6P589 184 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 ZCCHC12Q6PEW1 402 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 SHISA6Q6ZSJ9 500 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 COX15Q7KZN9 410 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 SPATA24Q86W54 205 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 NLGN4XQ8N0W4 816 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 OR2L13Q8N349 312 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 CDRT4Q8N9R6 151 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 FAM156AQ8NDB6 213 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 HIPK4Q8NE63 616 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 NLGN4YQ8NFZ3 816 aaPredicted RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 OR7G2Q8NG99 324 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 OR7G1Q8NGA0 311 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ADAMTS15Q8TE58 950 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 FIG4Q92562 907 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
CCM2-204ENST00000470837 NSMCE2Q96MF7 247 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ACTRT3Q9BYD9 372 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 CXorf21Q9HAI6 301 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 SLC22A11Q9NSA0 550 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 MAT2BQ9NZL9 334 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 ACTR3BQ9P1U1 418 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 P2RX2Q9UBL9 471 aa9.13□□□□□ -0.95
CCM2-204ENST00000470837 PRODH2Q9UF12 536 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms