RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 EBPLQ9BY08 206 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 TUBB1Q9H4B7 451 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 EML4Q9HC35 981 aaKnown RBP13.07□□□□□ -0.32
TOP3B-215ENST00000470338 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 MAT2BQ9NZL9 334 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 EHD3Q9NZN3 535 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 DNAJC15Q9Y5T4 150 aa13.07□□□□□ -0.32
TOP3B-215ENST00000470338 C2orf92A0A1B0GVN3 265 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 RGS14O43566 566 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ASNA1O43681 348 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 SEC22BO75396 215 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ZNF24P17028 368 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 DDCP20711 480 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 CNR1P21554 472 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ARRB2P32121 409 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 C6orf163Q5TEZ5 329 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 FAM71E1Q6IPT2 247 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 NOXRED1Q6NXP6 359 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 FAM180BQ6P0A1 224 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
TOP3B-215ENST00000470338 LRRC25Q8N386 305 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-215ENST00000470338 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 C17orf47Q8NEP4 570 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 OR2T11Q8NH01 316 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 RELTQ969Z4 430 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ADIPOR1Q96A54 375 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 MYNNQ9NPC7 610 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 SLC35C2Q9NQQ7 365 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 TAS2R7Q9NYW3 318 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 POLR3HQ9Y535 204 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-215ENST00000470338 PTGDR2Q9Y5Y4 395 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 ACTL7BQ9Y614 415 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 FREM3P0C091 2139 aa13.06□□□□□ -0.32
TOP3B-215ENST00000470338 CBX7O95931 251 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 CHEK2O96017 543 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 LDLRP01130 860 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 LINC00032P0C843 101 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 RNF224P0DH78 156 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 NEFHP12036 1026 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 SERPINB4P48594 390 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 GPR85P60893 370 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 TRMT12Q53H54 448 aaKnown RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 BEND6Q5SZJ8 279 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 BNC2Q6ZN30 1099 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 NUDCD3Q8IVD9 361 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 TAGAPQ8N103 731 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 ADCY4Q8NFM4 1077 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 ZNF675Q8TD23 568 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 PAQR8Q8TEZ7 354 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 EXOSC8Q96B26 276 aaKnown RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 SPACA9Q96E40 222 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 FCRL1Q96LA6 429 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 BRINP2Q9C0B6 783 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 LRTM1Q9HBL6 345 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 SACM1LQ9NTJ5 587 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 EXO1Q9UQ84 846 aaKnown RBP13.05□□□□□ -0.32
TOP3B-215ENST00000470338 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 ZNF835Q9Y2P0 537 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 FIS1Q9Y3D6 152 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
TOP3B-215ENST00000470338 PCNX1Q96RV3 2341 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 A0A1B0GUH1 482 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 PINLYPA6NC86 204 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 MYO1GB0I1T2 1018 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 TMEM233B4DJY2 109 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 TM9SF1O15321 606 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 BIRC5O15392 142 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 LRRTM2O43300 516 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 ERLIN1O75477 346 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 DHRS4L1P0CG22 281 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 CCL3P10147 92 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 GPX3P22352 226 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 PTGER1P34995 402 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 RFC3P40938 356 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 NR0B1P51843 470 aaKnown RBP13.04□□□□□ -0.32
TOP3B-215ENST00000470338 RBPJQ06330 500 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 DUSP8Q13202 625 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 MPP2Q14168 576 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 EXOSC7Q15024 291 aaKnown RBP13.04□□□□□ -0.32
TOP3B-215ENST00000470338 LTB4RQ15722 352 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 NTRK2Q16620 822 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 ZNF628Q5EBL2 1059 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
TOP3B-215ENST00000470338 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms