RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ASB4Q9Y574 426 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 COPG1Q9Y678 874 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SLC22A7Q9Y694 548 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MAU2Q9Y6X3 613 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FREM2Q5SZK8 3169 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 HEATR5BQ9P2D3 2071 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FAM186AA6NE01 2351 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PCM1Q15154 2024 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PCNX2A6NKB5 2137 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LOC100653049A0A140TA62 436 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TEX51A0A1B0GUA7 166 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 A0A1W2PR48 441 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 A0A1W2PS29 197 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 OR2W5A6NFC9 320 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 B4E171 279 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FAM227AF5H4B4 570 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 POLR1CO15160 346 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RDH16O75452 317 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SCRG1O75711 98 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 KRT34O76011 436 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LRATO95237 230 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ANXA4P09525 319 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 NCF2P19878 526 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GPX3P22352 226 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TSPAN7P41732 249 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 OR1D4P47884 311 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RAP1GDS1P52306 607 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 HNRNPFP52597 415 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 EFNA3P52797 238 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LIM2P55344 173 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 UFM1P61960 85 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MAT1AQ00266 395 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SLAMF1Q13291 335 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FAM53BQ14153 422 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 IL11RAQ14626 422 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SMU1Q2TAY7 513 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 C3orf38Q5JPI3 329 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CCNYL2Q5T2Q4 361 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 C1orf189Q5VU69 101 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GARNL3Q5VVW2 1013 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 METTL21CQ5VZV1 264 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 C18orf63Q68DL7 685 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LCN10Q6JVE6 187 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RHBDD2Q6NTF9 364 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FAM180BQ6P0A1 224 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TLDC1Q6P9B6 456 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TEPPQ6URK8 271 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CYP20A1Q6UW02 462 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ABHD13Q7L211 337 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SPATA19Q7Z5L4 167 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 NUDT13Q86X67 352 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PPP1R3BQ86XI6 285 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RIMKLAQ8IXN7 391 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GPR135Q8IZ08 494 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ZCCHC7Q8N3Z6 543 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 C16orf78Q8WTQ4 265 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ASB15Q8WXK1 588 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GFM2Q969S9 779 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TM4SF18Q96CE8 201 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FOXRED1Q96CU9 486 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 METTL2AQ96IZ6 378 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CSF3RQ99062 836 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MAPKAP1Q9BPZ7 522 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 YIPF4Q9BSR8 244 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TBCDQ9BTW9 1192 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LRMDAQ9H2I8 198 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SLC52A3Q9NQ40 469 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PFDN4Q9NQP4 134 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FBXO8Q9NRD0 319 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CUTCQ9NTM9 273 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 IRAK4Q9NWZ3 460 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TAS2R1Q9NYW7 299 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 C5AR2Q9P296 337 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ADAM29Q9UKF5 820 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 DAPP1Q9UN19 280 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SATB2Q9UPW6 733 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TMED5Q9Y3A6 229 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 L3MBTL1Q9Y468 752 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PTPRZ1P23471 2315 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CCDC187A0A096LP49 1063 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 GNG14A0A1W2PPG7 69 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 URADA6NGE7 173 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 GLOD5A6NK44 160 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CYR61O00622 381 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TXNDC9O14530 226 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 PGRMC2O15173 223 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 PROM1O43490 865 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 AKAP10O43572 662 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MGRN1O60291 552 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ENTPD5O75356 428 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 JRKO75564 520 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 NSA2O95478 260 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ATP6V1G2O95670 118 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 IL3P08700 152 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 FAM58BPP0C7Q3 252 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms