RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 R4GN57 208 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 YKT6O15498 198 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 GALR2O43603 387 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 DUX1O43812 170 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 B3GALT2O43825 422 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FGF17O60258 216 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 RDH16O75452 317 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NR2F6P10588 404 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ALPPL2P10696 532 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NELFEP18615 380 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FEN1P39748 380 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 MPLP40238 635 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 MANFP55145 182 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 RPS26P62854 115 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 HSD11B2P80365 405 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 LTB4RQ15722 352 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 SYT16Q17RD7 645 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 IQCCQ4KMZ1 466 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 OGFRL1Q5TC84 451 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FHL5Q5TD97 284 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 DGAT2L6Q6ZPD8 337 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 HORMAD2Q8N7B1 307 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FIG4Q92562 907 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 UCN2Q96RP3 112 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 CCDC3Q9BQI4 270 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FAIM2Q9BWQ8 316 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NPLQ9BXD5 320 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ROGDIQ9GZN7 287 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PDE7BQ9NP56 450 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 OLAHQ9NV23 265 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NTMQ9P121 344 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 AP3M1Q9Y2T2 418 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 SPTBP11277 2137 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 A0A0A6YYC8 382 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 DHRS12A0PJE2 317 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 HYKKA2RU49 373 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 URADA6NGE7 173 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 I3L1I5 382 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 UPK1AO00322 258 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 RETP07949 1114 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PEX2P28328 305 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 MAN2A2P49641 1150 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 NCBP2P52298 156 aaKnown RBP eCLIP7.76□□□□□ -1.175e-10■■■■■ 33.9
BRCA1-208ENST00000468300 TGM3Q08188 693 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 MGAT2Q10469 447 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FUT5Q11128 374 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 FAM53BQ14153 422 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 EXOSC6Q5RKV6 272 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM71Q6P5X7 295 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 TSEN54Q7Z6J9 526 aaKnown RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 STK32CQ86UX6 486 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PLXDC1Q8IUK5 500 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 OR4N5Q8IXE1 308 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 TOR1AIP2Q8NFQ8 470 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF501Q96CX3 271 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ZBED6CLQ96FA7 236 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM38AQ9H6F2 299 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 AGPAT4Q9NRZ5 378 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF69Q9UC07 566 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 RAPGEFL1Q9UHV5 662 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 PCDHGB5Q9Y5G0 923 aa7.76□□□□□ -1.17
BRCA1-208ENST00000468300 GOLGA4Q13439 2230 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 IGHV5-10-1A0A0J9YXX1 117 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 LNP1A1A4G5 178 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 HMGN4O00479 90 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CHST10O43529 356 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 LDB3O75112 727 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CER1O95813 267 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 BAG2O95816 211 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CPN2P22792 545 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PDX1P52945 283 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 EMP3P54852 163 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PCBP3P57721 371 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 SHC2P98077 582 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 MAT1AQ00266 395 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CYP51A1Q16850 503 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 FAM209AQ5JX71 171 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ZC3H14Q6PJT7 736 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 RABEPKQ7Z6M1 372 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 OR9A2Q8NGT5 310 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 AHCYL2Q96HN2 611 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF845Q96IR2 970 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 LOXL4Q96JB6 756 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 SPATA9Q9BWV2 254 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 SCPEP1Q9HB40 452 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 NTN4Q9HB63 628 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 BATF3Q9NR55 127 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 RXFP3Q9NSD7 469 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PHF11Q9UIL8 331 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 MAP4K5Q9Y4K4 846 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 RNF103-CHMP3A0A140T963 221 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 MYOCOSA0A1B0GUC4 107 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PRAMEF25A6NGN4 478 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PCP4L1A6NKN8 68 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 NTN3O00634 580 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CDX4O14627 284 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 NVLO15381 856 aaKnown RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 NME6O75414 186 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ERAL1O75616 437 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms