RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SUCNR1Q9BXA5 334 aa10.4□□□□□ -0.74
VPS26A-204ENST00000467852 TAS2R10Q9NYW0 307 aa10.4□□□□□ -0.74
VPS26A-204ENST00000467852 RIMKLBQ9ULI2 386 aa10.4□□□□□ -0.74
VPS26A-204ENST00000467852 USP22Q9UPT9 525 aa10.4□□□□□ -0.74
VPS26A-204ENST00000467852 TENM3Q9P273 2699 aa10.4□□□□□ -0.75
VPS26A-204ENST00000467852 A0A088AWK7 358 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 IQANK1A0A1B0GTG1 560 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 LOC390937A0A1W2PQ73 354 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 SHISA9B4DS77 424 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 H3BMM5 538 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 CD3EAPO15446 510 aaKnown RBP10.39□□□□□ -0.75
VPS26A-204ENST00000467852 NIPSNAP2O75323 286 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 TNFRSF21O75509 655 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 LY6HO94772 140 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 TNNT1P13805 278 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 ZNF10P21506 573 aaPredicted RBP10.39□□□□□ -0.75
VPS26A-204ENST00000467852 NEK2P51955 445 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 DVL1P1P54792 670 aaPredicted RBP10.39□□□□□ -0.75
VPS26A-204ENST00000467852 IRF9Q00978 393 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 DHX9Q08211 1270 aaKnown RBP10.39□□□□□ -0.75
VPS26A-204ENST00000467852 GUSBP1Q15486 140 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 CTSL3PQ5NE16 218 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 LRRC38Q5VT99 294 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 ZNF793Q6ZN11 406 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 C1QL4Q86Z23 238 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 PIWIL2Q8TC59 973 aaKnown RBP10.39□□□□□ -0.75
VPS26A-204ENST00000467852 FBF1Q8TES7 1133 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 DTNBP1Q96EV8 351 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 DHRS9Q9BPW9 319 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 SLITRK2Q9H156 845 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 MMP27Q9H306 513 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 METTL7AQ9H8H3 244 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 SERHLQ9NQF3 203 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 FKBP7Q9Y680 259 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 EXPH5Q8NEV8 1989 aa10.39□□□□□ -0.75
VPS26A-204ENST00000467852 LRP5LA4QPB2 252 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 C4orf51C9J302 202 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 E5RI56 91 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 CYR61O00622 381 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 LDB3O75112 727 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 IGKV3-11P04433 115 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 SERPINA6P08185 405 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 PEPDP12955 493 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 NPPBP16860 134 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 CTBP2P56545 445 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 STXBP1P61764 594 aaKnown RBP10.38□□□□□ -0.75
VPS26A-204ENST00000467852 KIF5AQ12840 1032 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 NAE1Q13564 534 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 TAB1Q15750 504 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 TRIM40Q6P9F5 258 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 TMEM64Q6YI46 380 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 ATG4DQ86TL0 474 aaPredicted RBP10.38□□□□□ -0.75
VPS26A-204ENST00000467852 KLHDC8BQ8IXV7 354 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 UBQLNLQ8IYU4 475 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 RADILQ96JH8 1075 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 PINK1Q9BXM7 581 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 WWTR1Q9GZV5 400 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 MARCH4Q9P2E8 410 aaPredicted RBP10.38□□□□□ -0.75
VPS26A-204ENST00000467852 EXO1Q9UQ84 846 aaKnown RBP10.38□□□□□ -0.75
VPS26A-204ENST00000467852 ZNF175Q9Y473 711 aa10.38□□□□□ -0.75
VPS26A-204ENST00000467852 A0A0G2JN53 185 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 LOC100653049A0A140TA62 436 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CCT8L1PA6NM43 557 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 PSMD3O43242 534 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 KRT34O76011 436 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 PLGP00747 810 aaPredicted RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 ESR1P03372 595 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 H2AFZP0C0S5 128 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 RHOXF2BP0C7M4 288 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 TPSB2P20231 275 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 EPHA1P21709 976 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 IL32P24001 234 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 APEX1P27695 318 aaKnown RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 RPL22P35268 128 aaKnown RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 FABP6P51161 128 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CHN2P52757 468 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 ACVR1Q04771 509 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CHRNB3Q05901 458 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 PON3Q15166 354 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 TPSAB1Q15661 275 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 TTLL9Q3SXZ7 439 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 SLC30A6Q6NXT4 461 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CASC4Q6P4E1 433 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 ALKBH5Q6P6C2 394 aaKnown RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 FIGNL1Q6PIW4 674 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 UBE2R2Q712K3 238 aaPredicted RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 H2AFVQ71UI9 128 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 LINC00523Q86TU6 105 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CCDC25Q86WR0 208 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 GALNT12Q8IXK2 581 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 MPP5Q8N3R9 675 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 FNDC9Q8TBE3 224 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 GAL3ST3Q96A11 431 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 RBM18Q96H35 190 aaKnown RBP10.37□□□□□ -0.75
VPS26A-204ENST00000467852 BIRC8Q96P09 236 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 DGAT2Q96PD7 388 aa10.37□□□□□ -0.75
VPS26A-204ENST00000467852 CSF3RQ99062 836 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms