RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	MAGEA8	P43361	318 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	AVPR1B	P47901	424 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	PSME3	P61289	254 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663		Q0VFX4	171 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	PGS1	Q32NB8	556 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	SAMD4B	Q5PRF9	694 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ZNF793	Q6ZN11	406 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663		Q6ZS92	163 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	DHDDS	Q86SQ9	333 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	RETREG3	Q86VR2	466 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	SCUBE1	Q8IWY4	988 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	PRSS58	Q8IYP2	241 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ZADH2	Q8N4Q0	377 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	KRTCAP2	Q8N6L1	136 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	TRIML2	Q8N7C3	387 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	FAM47B	Q8NA70	645 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ZFP28	Q8NHY6	868 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	GTF2H4	Q92759	462 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	MMAB	Q96EY8	250 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	CCDC115	Q96NT0	180 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	MESP1	Q9BRJ9	268 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	GPATCH1	Q9BRR8	931 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	CADM1	Q9BY67	442 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	AICDA	Q9GZX7	198 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	LHPP	Q9H008	270 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	NEUROD4	Q9HD90	331 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	GIMAP4	Q9NUV9	329 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	SH3BP4	Q9P0V3	963 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	LUZP4	Q9P127	313 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ABCD2	Q9UBJ2	740 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	DAPP1	Q9UN19	280 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	MRPS33	Q9Y291	106 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	RRP15	Q9Y3B9	282 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	NUP214	P35658	2090 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	IDS	B3KWA1	339 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663		H0YHG0	523 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	RTCA	O00442	366 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	RFXANK	O14593	260 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	PROM1	O43490	865 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	AKAP10	O43572	662 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	TMPRSS11D	O60235	418 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	SCN2B	O60939	215 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	CIB2	O75838	187 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	KLHL18	O94889	574 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	SLITRK5	O94991	958 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	LRAT	O95237	230 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	ANP32D	O95626	131 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	IFI6	P09912	130 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	GNLY	P22749	145 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	FRK	P42685	505 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	DGKQ	P52824	942 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	EMP2	P54851	167 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	EEFSEC	P57772	596 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	RAB8A	P61006	207 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	SNRPN	P63162	240 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	SLC25A3	Q00325	362 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	PRR30	Q53SZ7	412 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	CRB2	Q5IJ48	1285 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	NDUFAF5	Q5TEU4	345 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	AGAP7P	Q5VUJ5	663 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	IRAK1BP1	Q5VVH5	260 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	OR52E8	Q6IFG1	317 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	PGM2L1	Q6PCE3	622 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	NDUFAF7	Q7L592	441 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	FAM26E	Q8N5C1	309 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	TNIP2	Q8NFZ5	429 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	OR7A2P	Q8NGA2	310 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	CLHC1	Q8NHS4	586 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	CDC26	Q8NHZ8	85 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	TANK	Q92844	425 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	POP5	Q969H6	163 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	VPS33A	Q96AX1	596 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	AGAP4	Q96P64	663 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	PANX1	Q96RD7	426 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	CGREF1	Q99674	301 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	THTPA	Q9BU02	230 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	MUC13	Q9H3R2	512 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	RAD21L1	Q9H4I0	556 aa		11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	EXO1	Q9UQ84	846 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	MRPS2	Q9Y399	296 aa	Known RBP	11.28	□□□□□ -0.6
CTNS-205	ENST00000467663	NUP210L	Q5VU65	1888 aa		11.27	□□□□□ -0.6
CTNS-205	ENST00000467663	LOC102723996	A0A087X1L8	192 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663		A0A1W2PRB8	838 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	ASPDH	A6ND91	283 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	EVPLL	A8MZ36	301 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	BMP10	O95393	424 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	STAMBP	O95630	424 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	HEXB	P07686	556 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	NR2F6	P10588	404 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	LAMP1	P11279	417 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	COX6A1	P12074	109 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	CPN2	P22792	545 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	CERS1	P27544	350 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	NTS	P30990	170 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	UQCRFS1	P47985	274 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms