RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GZMKP49863 264 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 GFRA1P56159 465 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 AP1S2P56377 157 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 CLDN18P56856 261 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 DSCR9P59020 149 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 PCDH1Q08174 1060 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 THOC5Q13769 683 aaKnown RBP9.22□□□□□ -0.93
HDAC3-203ENST00000467533 FGFBP1Q14512 234 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 UGT3A1Q6NUS8 523 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 THOC6Q86W42 341 aaKnown RBP9.22□□□□□ -0.93
HDAC3-203ENST00000467533 DENND6AQ8IWF6 608 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 UBQLNLQ8IYU4 475 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 PRR22Q8IZ63 422 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 C7orf57Q8NEG2 295 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TTLQ8NG68 377 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 OR10H5Q8NGA6 315 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 ALG3Q92685 438 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TP53INP1Q96A56 240 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 RHBDF1Q96CC6 855 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 FBXL8Q96CD0 374 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 LINGO1Q96FE5 620 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 RBM18Q96H35 190 aaKnown RBP9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TRAF4Q9BUZ4 470 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-203ENST00000467533 OSBPL11Q9BXB4 747 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TRIM54Q9BYV2 358 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 ACTR6Q9GZN1 396 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 ABHD10Q9NUJ1 306 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TAS2R10Q9NYW0 307 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 SOX13Q9UN79 622 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 TFR2Q9UP52 801 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 COMMD10Q9Y6G5 202 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 C2orf92A0A1B0GVN3 265 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 C2orf72A6NCS6 295 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ELOA3DA6NLF2 546 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 AP3B1O00203 1094 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 CPN2P22792 545 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 TCEA1P23193 301 aaKnown RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 STIP1P31948 543 aaKnown RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 SLC1A2P43004 574 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 MAGEA1P43355 309 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 NRG3P56975 720 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 SLC37A1P57057 533 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 RPS13P62277 151 aaKnown RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 BASP1P80723 227 aaKnown RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 TGM3Q08188 693 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 SLBPQ14493 270 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ZNF267Q14586 743 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 CYP1B1Q16678 543 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 PGGHGQ32M88 737 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ELOA3BQ3SY89 546 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ZNF672Q499Z4 452 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 HLA-DQA1Q5Y7H0 255 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 HIST2H2BDQ6DRA6 164 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ABHD17CQ6PCB6 329 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 TMIGD1Q6UXZ0 262 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 KBTBD8Q8NFY9 601 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ELOA3Q8NG57 546 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 FIG4Q92562 907 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 C11orf24Q96F05 449 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.94
HDAC3-203ENST00000467533 MAPKAP1Q9BPZ7 522 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 LYRM4Q9HD34 91 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 MOCS1Q9NZB8 636 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 WWOXQ9NZC7 414 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 KLRF1Q9NZS2 232 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 IFNKQ9P0W0 207 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 PAK5Q9P286 719 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 KCNE2Q9Y6J6 123 aa9.21□□□□□ -0.94
HDAC3-203ENST00000467533 TCRBV7S2A1N4TA0A589 114 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ANKDD1BA6NHY2 528 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 CLEC3AO75596 197 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 CBR3O75828 277 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ALDOAP04075 364 aaKnown RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 FESP07332 822 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 PYGBP11216 843 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ALOX15P16050 662 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 USF1P22415 310 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 GSTM2P28161 218 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 IGLV3-21P80748 117 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 KLF1Q13351 362 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 SPRED3Q2MJR0 410 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ADPRMQ3LIE5 342 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 SLC30A6Q6NXT4 461 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 STAC2Q6ZMT1 411 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 GPSM1Q86YR5 675 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ZNF525Q8N782 197 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 CCDC89Q8N998 374 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 FAM168AQ92567 244 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 ZNF669Q96BR6 464 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-203ENST00000467533 NDNQ99608 321 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 GALNT9Q9HCQ5 603 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 FANCFQ9NPI8 374 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 DNAJC11Q9NVH1 559 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 FAIMQ9NVQ4 179 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 DKKL1Q9UK85 242 aa9.2□□□□□ -0.94
HDAC3-203ENST00000467533 SLC22A14Q9Y267 594 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms