RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 YBEYP58557 167 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 KIAA1024LP59773 190 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GNB2P62879 340 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 MECOMQ03112 1051 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 FOLH1Q04609 750 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 RPS6KA1Q15418 735 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 IQCCQ4KMZ1 466 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 IFI44LQ53G44 452 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 DNAJC21Q5F1R6 531 aaKnown RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF789Q5FWF6 425 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 C2orf66Q6UXQ4 117 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SIAH3Q8IW03 269 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CCDC83Q8IWF9 413 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ENTHD1Q8IYW4 607 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 RNF149Q8NC42 400 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 OR2L5Q8NG80 312 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 OR4F5Q8NH21 305 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ST7LQ8TDW4 575 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GANCQ8TET4 914 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 BCL2L2Q92843 193 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 IMMP1LQ96LU5 166 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 PRAM1Q96QH2 718 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ERGIC2Q96RQ1 377 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 RAB40CQ96S21 281 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF184Q99676 751 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SPXQ9BT56 116 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 XPO4Q9C0E2 1151 aaKnown RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 LSG1Q9H089 658 aaKnown RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ABCG8Q9H221 673 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 MTIF3Q9H2K0 278 aaKnown RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF665Q9H7R5 613 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SRD5A3Q9H8P0 318 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 RNPEPL1Q9HAU8 725 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 TMEM161AQ9NX61 479 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF319Q9P2F9 582 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 FBXL5Q9UKA1 691 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 FBXW2Q9UKT8 454 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 STX8Q9UNK0 236 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 TMED7Q9Y3B3 224 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 MTF2Q9Y483 593 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 ETV7Q9Y603 341 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SPAG9O60271 1321 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 C13orf42A0A1B0GVH6 325 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SYCE3A1L190 88 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 RNF212BA8MTL3 300 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 KBTBD13C9JR72 458 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CTDSPLO15194 276 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 DUSP11O75319 330 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 AKAP3O75969 853 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 APBB3O95704 486 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SLC4A1P02730 911 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 ASNSP08243 561 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SBK2P0C263 348 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 C8orf89P0DMQ9 161 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 LAMP1P11279 417 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 MAPK3P27361 379 aaPredicted RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CD86P42081 329 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 NPBWR1P48145 328 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SLC12A3P55017 1021 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 IL1RL1Q01638 556 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 PRKCEQ02156 737 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CETN1Q12798 172 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 PSG7Q13046 419 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 HFEQ30201 348 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CELF3Q5SZQ8 465 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 ABRAXAS1Q6UWZ7 409 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 RABEPKQ7Z6M1 372 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CNTN4Q8IWV2 1026 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SFRP1Q8N474 314 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CHDHQ8NE62 594 aaPredicted RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 OR13F1Q8NGS4 319 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF671Q8TAW3 534 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 UBLCP1Q8WVY7 318 aaPredicted RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CRYGNQ8WXF5 182 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SEPT8Q92599 483 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 AP2M1Q96CW1 435 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SNRNP40Q96DI7 357 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 PIWIL1Q96J94 861 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 MAGEB18Q96M61 343 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 OSBPL8Q9BZF1 889 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 C1orf21Q9H246 121 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 AKIRIN1Q9H9L7 192 aaPredicted RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 ANO10Q9NW15 660 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 HPF1Q9NWY4 346 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 SLCO1C1Q9NYB5 712 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CYP39A1Q9NYL5 469 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 IL19Q9UHD0 177 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 HOOK1Q9UJC3 728 aaKnown RBP1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 APPL1Q9UKG1 709 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 ITM2BQ9Y287 266 aa1.78□□□□□ -2.12
GTF3C3-209ENST00000466862 CDC42BPBQ9Y5S2 1711 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 A0A0A6YYC8 382 aaPredicted RBP1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 RNF103-CHMP3A0A140T963 221 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 ILVBLA1L0T0 632 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 I3L1I5 382 aaPredicted RBP1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 CCSO14618 274 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 GPAA1O43292 621 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 VEGFDO43915 354 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 PRPSAP2O60256 369 aa1.77□□□□□ -2.13
GTF3C3-209ENST00000466862 NME6O75414 186 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms