RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SLC25A25Q6KCM7 469 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 RNF111Q6ZNA4 994 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 C16orf47Q6ZP98 133 aaPredicted RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 TRIM42Q8IWZ5 723 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 DDIASQ8IXT1 998 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 DND1Q8IYX4 353 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 CISD2Q8N5K1 135 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 DNAJB8Q8NHS0 232 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 AGR3Q8TD06 166 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 THAP3Q8WTV1 239 aaPredicted RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ADIPOR1Q96A54 375 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 MTERF3Q96E29 417 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 C19orf60Q96EN9 201 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 EGLN2Q96KS0 407 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 SLX1AQ9BQ83 275 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 CNPPD1Q9BV87 410 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 WWTR1Q9GZV5 400 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 OR10A5Q9H207 317 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 ASF1BQ9NVP2 202 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 THAP1Q9NVV9 213 aa8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 COPG1Q9Y678 874 aaKnown RBP8.77□□□□□ -1.01
SDCCAG3-208ENST00000466579 TENM4Q6N022 2769 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 A0A087WV62 115 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CLEC18AA5D8T8 446 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 WWP2O00308 870 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 PLOD2O00469 737 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 SLC25A12O75746 678 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 BCAS2O75934 225 aaPredicted RBP8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 OR6B1O95007 311 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 FBXO45P0C2W1 286 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 PRPS2P11908 318 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 PCSK2P16519 638 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 NT5EP21589 574 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 GPX3P22352 226 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 MAPK1P28482 360 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 MPIP34949 423 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 SOX3P41225 446 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 EMDP50402 254 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 TDGF1P3P51864 188 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 EMX2Q04743 252 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 IGFBP7Q16270 282 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATP6AP1LQ52LC2 224 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATG16L1Q676U5 607 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 FAM111BQ6SJ93 734 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 OPN5Q6U736 354 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CLEC18BQ6UXF7 455 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 SLC29A4Q7RTT9 530 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 TICAM1Q8IUC6 712 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CYP4Z2PQ8N1L4 340 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 TMEM156Q8N614 296 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 BCORP1Q8N888 145 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 GOLM1Q8NBJ4 401 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 TMEM178AQ8NBL3 297 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CLEC18CQ8NCF0 446 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 C16orf52Q8NHV5 167 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 GRHL3Q8TE85 626 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 DOK4Q8TEW6 326 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 FAR1Q8WVX9 515 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ASB15Q8WXK1 588 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 EXOSC8Q96B26 276 aaKnown RBP8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 NTNG2Q96CW9 530 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 SGCZQ96LD1 299 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 C5orf34Q96MH7 638 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 AMDHD1Q96NU7 426 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 PAIP2Q9BPZ3 127 aaKnown RBP8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 HES7Q9BYE0 225 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 TRIM4Q9C037 500 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 REEP4Q9H6H4 257 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 MANSC1Q9H8J5 431 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 LIN28AQ9H9Z2 209 aaKnown RBP8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 MEAF6Q9HAF1 191 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 AGPAT4Q9NRZ5 378 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 GIMAP4Q9NUV9 329 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 PNPOQ9NVS9 261 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ANKRD10Q9NXR5 420 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 GIMAP2Q9UG22 337 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 ENTPD4Q9Y227 616 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 CFL2Q9Y281 166 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 POLEQ07864 2286 aa8.76□□□□□ -1.01
SDCCAG3-208ENST00000466579 EML6Q6ZMW3 1958 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 C2orf92A0A1B0GVN3 265 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATP6AP2A0A1C7CYW4 349 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 A8MVJ9 347 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 TO15178 435 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 PEX11AO75192 247 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 VPS4BO75351 444 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 SKAP2O75563 359 aaPredicted RBP8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 ATP6AP2O75787 350 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 RASAL1O95294 804 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 PSMG1O95456 288 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 CBX6O95503 412 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 CRYABP02511 175 aaKnown RBP8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 EDN3P14138 238 aa8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 ST13P50502 369 aaKnown RBP8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 OC90Q02509 493 aaPredicted RBP8.75□□□□□ -1.01
SDCCAG3-208ENST00000466579 MAD2L1Q13257 205 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms