RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ABHD13Q7L211 337 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 SPARTQ8N0X7 666 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 D2HGDHQ8N465 521 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF655Q8N720 491 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 OR1L3Q8NH93 324 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF566Q969W8 418 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 CCDC74BQ96LY2 380 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF285Q96NJ3 590 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 DUSP26Q9BV47 211 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 SMURF2Q9HAU4 748 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 TMEM9BQ9NQ34 198 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 NCDNQ9UBB6 729 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PCDHGA8Q9Y5G5 932 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 SNX5Q9Y5X3 404 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZFHX2Q9C0A1 2572 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 A0A0A6YYC8 382 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 I3L1I5 382 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 HYAL3O43820 417 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 SERPINA1P01009 418 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 CCDC159P0C7I6 412 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 DDCP20711 480 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 HPCAL1P37235 193 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 TRPC1P48995 793 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 DUSP3P51452 185 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 CLDN6P56747 220 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 TMED1Q13445 227 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF750Q32MQ0 723 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF691Q5VV52 312 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 NAXDQ8IW45 347 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 SETD9Q8NE22 299 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 OR4D9Q8NGE8 314 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 OR8J2Q8NGG1 315 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PPCDCQ96CD2 204 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 COQ8BQ96D53 544 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PHF12Q96QT6 1004 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 GFM1Q96RP9 751 aaKnown RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 CSF3RQ99062 836 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 BCL7BQ9BQE9 202 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 AMBRA1Q9C0C7 1298 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ZNF768Q9H5H4 540 aaKnown RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 MIEF1Q9NQG6 463 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 FTSJ1Q9UET6 329 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ATP6V1HQ9UI12 483 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PSME2Q9UL46 239 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 MAGED1Q9Y5V3 778 aaPredicted RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 HSPE1-MOB4S4R3N1 261 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 EP300Q09472 2414 aaPredicted RBP17.52■□□□□ 0.4
CAPN3-209ENST00000466222 LOC100130705A0A1B0GUX0 176 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 PROM1O43490 865 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 FOXS1O43638 330 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 GALR3O60755 368 aaPredicted RBP17.52■□□□□ 0.4
CAPN3-209ENST00000466222 E2F6O75461 281 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 AIFM1O95831 613 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 INHBBP09529 407 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 ITIH1P19827 911 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 MATN1P21941 496 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 PTGER1P34995 402 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 SRSF11Q05519 484 aaKnown RBP17.52■□□□□ 0.4
CAPN3-209ENST00000466222 VAC14Q08AM6 782 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 FGD3Q5JSP0 725 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 GTF2IRD2BQ6EKJ0 949 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 ERICH5Q6P6B1 374 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 SHQ1Q6PI26 577 aaKnown RBP17.52■□□□□ 0.4
CAPN3-209ENST00000466222 SERPINA11Q86U17 422 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 GTF2IRD2Q86UP8 949 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 FBLIM1Q8WUP2 373 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 SLAMF7Q9NQ25 335 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 FAIMQ9NVQ4 179 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 KCMF1Q9P0J7 381 aa17.52■□□□□ 0.4
CAPN3-209ENST00000466222 TMEM184BQ9Y519 407 aaPredicted RBP17.52■□□□□ 0.4
CAPN3-209ENST00000466222 MUC6Q6W4X9 2439 aa17.52■□□□□ 0.39
CAPN3-209ENST00000466222 RP1P56715 2156 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 HYKKA2RU49 373 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 URADA6NGE7 173 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 EVPLLA8MZ36 301 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 FAM227AF5H4B4 570 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 NTN3O00634 580 aaPredicted RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 HS6ST1O60243 411 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CBFA2T3O75081 653 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 RDH16O75452 317 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 BCL10O95999 233 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 ZNF12P17014 697 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 LIM2P55344 173 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 TGM3Q08188 693 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 HEPACAMQ14CZ8 416 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CSRP2Q16527 193 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 MANEAQ5SRI9 462 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 PHF19Q5T6S3 580 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 IKBIPQ70UQ0 350 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 MUL1Q969V5 352 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 EXOSC8Q96B26 276 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 NAA50Q9GZZ1 169 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CHRNA10Q9GZZ6 450 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 FGF21Q9NSA1 209 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 SLC22A7Q9Y694 548 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 UGT2B11O75310 529 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 OR2B3O76000 313 aa17.51■□□□□ 0.39
CAPN3-209ENST00000466222 CPSF4O95639 269 aaKnown RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 ABCB1P08183 1280 aaPredicted RBP17.51■□□□□ 0.39
CAPN3-209ENST00000466222 ACP1P24666 158 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms