RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 PSD3Q9NYI0 1048 aa13.3□□□□□ -0.28
ALMS1-202ENST00000464408 DMGDHQ9UI17 866 aaKnown RBP13.3□□□□□ -0.28
ALMS1-202ENST00000464408 MAP1AP78559 2803 aaPredicted RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 CPMP14384 443 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 S1PR1P21453 382 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 GPX3P22352 226 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 PIK3R1P27986 724 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 PHBP35232 272 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 SOX18P35713 384 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 CDH13P55290 713 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 CRYZQ08257 329 aaKnown RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 MGAT2Q10469 447 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 GALNT1Q10472 559 aaPredicted RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 RPS6KA2Q15349 733 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 DCST1Q5T197 706 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 RIPPLY2Q5TAB7 128 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 LETMD1Q6P1Q0 360 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 FAM111BQ6SJ93 734 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 SPNS3Q6ZMD2 512 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 DND1Q8IYX4 353 aaKnown RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 NOA1Q8NC60 698 aaKnown RBP13.29□□□□□ -0.28
ALMS1-202ENST00000464408 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 OR4F6Q8NGB9 312 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 OR4K14Q8NGD5 310 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 SPPL2AQ8TCT8 520 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 HBEGFQ99075 208 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 NTMT1Q9BV86 223 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 FUT8Q9BYC5 575 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 OR10A5Q9H207 317 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 KCNN3Q9UGI6 736 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 CES1P1Q9UKY3 287 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 SLC6A5Q9Y345 797 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
ALMS1-202ENST00000464408 STX16-NPEPL1H3BU86 382 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 STX16O14662 325 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 TRAPPC6AO75865 159 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 RPS17P08708 135 aaKnown RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 NT5EP21589 574 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ECHS1P30084 290 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 CKAP4Q07065 602 aaKnown RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 EXOSC7Q15024 291 aaKnown RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ACSF3Q4G176 576 aaPredicted RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 TCHHL1Q5QJ38 904 aaPredicted RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 METTL2BQ6P1Q9 378 aaKnown RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 COMMD6Q7Z4G1 85 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ZZZ3Q8IYH5 903 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 CLYBLQ8N0X4 340 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 METTL4Q8N3J2 472 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 LIX1Q8N485 282 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 DCAKDQ8WVC6 231 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 GNRHR2Q96P88 292 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
ALMS1-202ENST00000464408 UBQLN3Q9H347 655 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 QPCTLQ9NXS2 382 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ZNF225Q9UK10 706 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 SLC12A4Q9UP95 1085 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 C15orf41Q9Y2V0 281 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 NF1P21359 2839 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ACANP16112 2415 aa13.28□□□□□ -0.28
ALMS1-202ENST00000464408 ABCA4P78363 2273 aa13.27□□□□□ -0.28
ALMS1-202ENST00000464408 ANKRD33BA6NCL7 494 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 TP53I11O14683 189 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 GNB5O14775 395 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 SMIM24O75264 130 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 NME6O75414 186 aaPredicted RBP13.27□□□□□ -0.29
ALMS1-202ENST00000464408 ZWINTO95229 277 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 PDYNP01213 254 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 INHBAP08476 426 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 RBP1P09455 135 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 GABRA1P14867 456 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 ABCD3P28288 659 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 FEN1P39748 380 aaKnown RBP13.27□□□□□ -0.29
ALMS1-202ENST00000464408 CASP3P42574 277 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 CDK9P50750 372 aaKnown RBP13.27□□□□□ -0.29
ALMS1-202ENST00000464408 MAPK12P53778 367 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 TBL3Q12788 808 aaKnown RBP13.27□□□□□ -0.29
ALMS1-202ENST00000464408 IFT88Q13099 833 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 LTB4RQ15722 352 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 PRICKLE4Q2TBC4 344 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 SLC25A35Q3KQZ1 300 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 GGTA1PQ4G0N0 100 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 EIPR1Q53HC9 387 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 TMEM198Q66K66 360 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 POMZP3Q6PJE2 187 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 ARSKQ6UWY0 536 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 MILR1Q7Z6M3 343 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
ALMS1-202ENST00000464408 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms