RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TRAPPC6AO75865 159 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 SNX4O95219 450 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 GUCA1CO95843 209 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 TGM6O95932 706 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CGAP01215 116 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 THBDP07204 575 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 C1GALT1C1LP0DN25 315 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CYP4B1P13584 511 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CD22P20273 847 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 ZNF10P21506 573 aaPredicted RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 THBS2P35442 1172 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CPOXP36551 454 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 PTGDSP41222 190 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CASP3P42574 277 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 LHX2P50458 406 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 DIO3P55073 304 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 NAP1L1P55209 391 aaKnown RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 ATP5J2P56134 94 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CLDN18P56856 261 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 FBXW4P57775 412 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 EEF1A1P68104 462 aaKnown RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 CDKL1Q00532 357 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 GAB1Q13480 694 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 THOC5Q13769 683 aaKnown RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 E2F2Q14209 437 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 RCN2Q14257 317 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 SLBPQ14493 270 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC3-202ENST00000462899 GUSBP1Q15486 140 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 ETFDHQ16134 617 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CLEC12BQ2HXU8 276 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CHRFAM7AQ494W8 412 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 EEF1A1P5Q5VTE0 462 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 TIGD3Q6B0B8 471 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 VWA1Q6PCB0 445 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 GALNT7Q86SF2 657 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 PALM2Q8IXS6 379 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 SYCE1Q8N0S2 351 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 GABPB2Q8TAK5 448 aaPredicted RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 CALML6Q8TD86 181 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 TMEM171Q8WVE6 324 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 DIO2Q92813 273 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 CAVIN3Q969G5 261 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 PDLIM5Q96HC4 596 aaKnown RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 SERPINB12Q96P63 405 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 REG4Q9BYZ8 158 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 OR2B2Q9GZK3 357 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 PITHD1Q9GZP4 211 aaPredicted RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 CXorf56Q9H5V9 222 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 PSD3Q9NYI0 1048 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 WWOXQ9NZC7 414 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 ZNF490Q9ULM2 529 aaPredicted RBP6.98□□□□□ -1.29
SMC3-202ENST00000462899 KCNE2Q9Y6J6 123 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 MAGEB16A2A368 324 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 FRG2CA6NGY1 282 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 OR6C76A6NM76 312 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 B4DXG7 233 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 PLAUP00749 431 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 AHSGP02765 367 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 CRHP06850 196 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 CCDC175P0C221 793 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 COX7A2P14406 83 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZNF708P17019 499 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 GNAZP19086 355 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 TNNI3P19429 210 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 CHMP24386 653 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ATP5A1P25705 553 aaKnown RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 MSH2P43246 934 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 KIR2DL2P43627 348 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 KCNC1P48547 511 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 IL2P60568 153 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 HERVK_113P63132 956 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ERVK-8P63133 956 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 C18orf21Q32NC0 220 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 HSP90AA5PQ58FG0 334 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 C6orf52Q5T4I8 152 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 C10orf62Q5T681 223 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 SEL1L2Q5TEA6 688 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 TMEM64Q6YI46 380 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZNF704Q6ZNC4 412 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 SH2D5Q6ZV89 423 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZNF550Q7Z398 422 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 YRDCQ86U90 279 aaKnown RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 OR4N5Q8IXE1 308 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ST13P4Q8IZP2 240 aaPredicted RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 ZNF611Q8N823 705 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ACOT4Q8N9L9 421 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 MCUQ8NE86 351 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 C7orf57Q8NEG2 295 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ADIPOR1Q96A54 375 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 TP53INP1Q96A56 240 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 PPWD1Q96BP3 646 aaKnown RBP6.97□□□□□ -1.29
SMC3-202ENST00000462899 WDR34Q96EX3 536 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 ART5Q96L15 291 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 DGAT2Q96PD7 388 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 KCNC2Q96PR1 638 aa6.97□□□□□ -1.29
SMC3-202ENST00000462899 GAL3ST4Q96RP7 486 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms