RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CNPPD1Q9BV87 410 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 OR10A5Q9H207 317 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 ZNF395Q9H8N7 513 aaPredicted RBP11.19□□□□□ -0.62
HPS1-206ENST00000462743 GIMAP4Q9NUV9 329 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 THAP1Q9NVV9 213 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 FIS1Q9Y3D6 152 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 ZNF407Q9C0G0 2248 aa11.19□□□□□ -0.62
HPS1-206ENST00000462743 WWP2O00308 870 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 KLF11O14901 512 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 NME2P1O60361 137 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 PLOD3O60568 738 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ZNF354AO60765 605 aaPredicted RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 SNNO75324 88 aaPredicted RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 NADKO95544 446 aaPredicted RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 CBX7O95931 251 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 PRPS2P11908 318 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 BCKDHAP12694 445 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 PCSK2P16519 638 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 SDC1P18827 310 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 NME2P22392 152 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 MAPK1P28482 360 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 SSTR4P31391 388 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 KCNC4Q03721 635 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 EMX2Q04743 252 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 PDE7AQ13946 482 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 EBPQ15125 230 aaKnown RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 ZNF791Q3KP31 576 aaPredicted RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 ATP6AP1LQ52LC2 224 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ZNF628Q5EBL2 1059 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 C6orf163Q5TEZ5 329 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 FAM111BQ6SJ93 734 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 C16orf47Q6ZP98 133 aaPredicted RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 TICAM1Q8IUC6 712 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 VWA5B2Q8N398 1253 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ANKRD42Q8N9B4 389 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 GOLM1Q8NBJ4 401 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ST6GALNAC3Q8NDV1 305 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 DOK4Q8TEW6 326 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ASB15Q8WXK1 588 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ZBTB9Q96C00 473 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 PAIP2Q9BPZ3 127 aaKnown RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 SLX1AQ9BQ83 275 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 TRIM4Q9C037 500 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 WWTR1Q9GZV5 400 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 REEP4Q9H6H4 257 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 LIN28AQ9H9Z2 209 aaKnown RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 SH2D2AQ9NP31 389 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ANKRD10Q9NXR5 420 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ASIC5Q9NY37 505 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 ENTPD4Q9Y227 616 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
HPS1-206ENST00000462743 PCNX1Q96RV3 2341 aa11.18□□□□□ -0.62
HPS1-206ENST00000462743 FREM3P0C091 2139 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 A0A087WV62 115 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 C2orf92A0A1B0GVN3 265 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 A8MVJ9 347 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 TCP11X1B4DZS4 312 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 PLOD2O00469 737 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 VPS4BO75351 444 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 SLC25A12O75746 678 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 OR6B1O95007 311 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 NAGAP17050 411 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 SOX3P41225 446 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 FRKP42685 505 aaPredicted RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 PPICP45877 212 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 C21orf58P58505 322 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 DCAF7P61962 342 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 MAD2L1Q13257 205 aaPredicted RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 GALNTL6Q49A17 601 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 TRMT12Q53H54 448 aaKnown RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 FAM180AQ6UWF9 173 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 GALNTL5Q7Z4T8 443 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 R3HCC1LQ7Z5L2 792 aaKnown RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 CYP4Z2PQ8N1L4 340 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 NATD1Q8N6N6 113 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 POGLUT1Q8NBL1 392 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 C16orf52Q8NHV5 167 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 SLC22A8Q8TCC7 542 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 AGR3Q8TD06 166 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 NR4A3Q92570 626 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 EXOSC8Q96B26 276 aaKnown RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 HES7Q9BYE0 225 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 MANSC1Q9H8J5 431 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 MIEF1Q9NQG6 463 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 HPF1Q9NWY4 346 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 PRODH2Q9UF12 536 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 ATP6V1HQ9UI12 483 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 VPS4AQ9UN37 437 aa11.17□□□□□ -0.62
HPS1-206ENST00000462743 KLF13Q9Y2Y9 288 aaPredicted RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
HPS1-206ENST00000462743 ATP6AP2A0A1C7CYW4 349 aa11.16□□□□□ -0.62
HPS1-206ENST00000462743 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
HPS1-206ENST00000462743 HMGB1P1B2RPK0 211 aaPredicted RBP11.16□□□□□ -0.62
HPS1-206ENST00000462743 KLRC4-KLRK1H3BQV0 150 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms